Tripterygium wilfordii (thunder duke vine): 120012844
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Entry
120012844 CDS
T07256
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11-like isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120012844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120012844
03036 Chromosome and associated proteins [BR:
twl03036
]
120012844
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
120012844
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
120012844
RSF complex
120012844
WICH complex
120012844
B-WICH complex
120012844
NORC complex
120012844
BRF complex
120012844
NuRF complex (fruit fly)
120012844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
DBINO
HDA2-3
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
120012844
NCBI-ProteinID:
XP_038720308
LinkDB
All DBs
Position
13:16341973..16350751
Genome browser
AA seq
1062 aa
AA seq
DB search
MAKPSKPHSSSDEAMSDATNSSSEEEQVQDQMKEEEDDEEELQAVAQSAEDDDDDAPPDS
DEEDADEEDEEDGNQAEISKREKARLTEMKKMKKHKIQEILDAQNAAIDADMNNKGKGRL
KFLLQQTELFAHFAKGNQSTSQKKMRGRGRHASKLTEEEEDEEYLKEEEDGLSGNTRLVT
QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGP
HMVVAPKSTLGNWMNEIRRFCPLLRAVKFLGNPDERKHIREDLLAAGKFDVCVTSFEMAI
KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLL
NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI
LKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYT
TGDHIITHAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNT
GGDDRDASIEAFNRPGSDKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRA
HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR
FGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDD
EKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPSKPKEPRIPRMPQLHD
FQFFNTQRLSELYEKEVRYLMQTHQKNQLKDTIDVDEPEEAGDPLTAEELEEKERLLEEG
FSSWSRRDFNTFIRACEKYGRNDIKSIATEMEGKAEEEVERYAKVFKERYKELNDYDRII
KNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHK
LGYGNWDELKAAFRTSSIFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARK
EKKLAKNPPSKRALARQTESPSSLKKRKQSSMDDYVSAGRRK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccatcgaagccacactcttcgtctgatgaggcgatgtccgatgcaaccaat
tcttcgtcggaggaggagcaagtccaggatcagatgaaagaggaagaggatgacgaggag
gagctccaggcggttgcgcaatctgctgaggatgatgacgacgacgccccgccggattcc
gacgaagaggacgctgacgaggaggatgaggaggatgggaaccaagctgaaattagcaag
cgtgagaaagccagacttacagaaatgaagaaaatgaagaaacacaagattcaggaaata
ttggatgctcaaaatgctgccatagatgctgacatgaataataagggtaaggggcgtttg
aagtttcttctacagcaaacagaattgtttgctcactttgccaaaggcaatcagtctaca
tcacagaagaagatgagaggaaggggtcgccatgcatcaaaactcactgaagaggaagaa
gacgaggaatacctgaaagaggaagaagatggtttgtcaggaaacactcgtctggtaaca
cagccatcttgcattcagggtaaaatgagggactaccaactcgctggattaaactggctc
atacgattgtatgagaatggcataaatggaatccttgcggatgaaatgggtcttggaaaa
acattgcagactatctcgttgttgggctacttgcatgaattcagaggaattactggccct
catatggtggttgcgccaaaatctactcttggcaactggatgaatgaaattcgccgtttt
tgcccactcttgcgcgctgtaaagtttttaggaaaccctgatgagaggaagcatatacgt
gaggatttacttgctgcgggcaagtttgatgtctgtgtcacaagttttgaaatggccatc
aaagagaagactgctttgcgtcgctttagttggcgctatataatcattgatgaagcccat
cgcatcaagaatgaaaattcactcctttcgaaaacaatgaggctttataacaccaattat
cgccttcttatcacgggtactccactccagaacaatcttcatgaactctggtcgcttctg
aacttcttactaccggagattttcagttcagctgaaacttttgatgaatggtttcaaatt
tctggtgaaaatgaccagcaggaagttgttcaacaacttcacaaggttcttcgaccattt
ctcctccgaaggttgaaatctgatgttgaaaagggtttacctccaaagaaggaaactatt
ctcaaagtggggatgtcccagatgcagaaacagtattacaaggccttgctgcagaaggat
ctggaagttgttaatgctggtggagagcggaaacgtctgttgaacatagcaatgcagttg
cgcaaatgctgtaatcacccatatctgtttcaaggtgctgagcctggacctccttatacc
acaggagaccatattattacacatgctggtaaaatggttttgttggacaagttgcttcca
aagctgaaagagcgtgattcaagggttttaatattttcacagatgacgaggttgcttgac
attcttgaggactatttaatgtttcgtggatatctgtattgccggattgatggtaatact
ggtggagacgatcgtgatgcttcgattgaagcctttaacaggccaggaagtgacaaattt
gtgttcttattatccaccagagctgggggccttggtattaatcttgctactgcagatgtt
gttatcctttatgatagtgattggaacccacaggttgatttgcaagcgcaggaccgtgct
cacaggattggtcaaaagaaagaagttcaagtgttccggttttgcacagagtacactatt
gaggaaaaagttattgaaagggcttacaaaaagcttgcacttgatgctttggtcattcaa
caaggacggctagcagaacagaaaactgttaataaagatgagctgcttcaaatggtgagg
tttggtgctgaaatggttttcagttcgaaggatagtacaatcacagatgaggacattgat
agaatcatcgccaaaggagaggaggcgaccgctgagcttgacgcaaagatgaagaaattc
acagaagatgcaattaaatttaaaatggacgacactgctgaattgtatgattttgacgat
gaaaaggatgaaaacaaatttgatttcaagaaaatagtcagtgaaaactggattgaacca
ccaaagagagagcggaagcgcaactactcagaatctgaatattttaagcaaacaatgcgc
caaggcgggccatcaaagccaaaggagcctcgaattccccgcatgccccagctgcatgat
ttccagttttttaatacgcagaggctgagtgagttgtatgagaaagaagtgcgctacctc
atgcaaacacatcaaaagaatcagttaaaagacacaattgatgtggacgagcctgaagag
gctggagatccgttgactgctgaggagttggaagagaaggagcggctactggaagaagga
ttttcttcttggagtagaagagacttcaatacttttattagggcctgtgagaagtatggc
cggaatgacattaaaagtattgctactgaaatggaagggaaggcagaagaggaagttgaa
agatatgctaaagttttcaaagaacggtataaggagctaaatgattatgataggataatt
aagaatattgaaagaggtgaggcgagaatttctcgtaaagatgaaatcatgaaagctatt
gggaaaaaattggatcgttacaagaatccatggttagaattgaagatccagtatggtcaa
aacaaagggaagttgtacaacgaagaatgtgatcgttttatgatatgcatggttcacaag
cttggatatgggaattgggatgaactaaaagcagcatttcggacatcatccatatttcga
tttgattggtttgtgaagtctcgcacaactcaagaacttgccaggagatgtgacacctta
atccgactagtggagaaggaaaaccaagaatacgatgagagagagagacaagcccgcaaa
gagaagaaacttgctaagaaccccccatccaagcgtgcattggcaaggcaaactgagagt
ccaagctccctgaagaaacggaaacagtcgtcaatggatgattacgtgagcgctgggagg
aggaaatga
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integrated database retrieval system
