Tripterygium wilfordii (thunder duke vine): 120012891
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Entry
120012891 CDS
T07256
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
120012891
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
Other 90S particles
120012891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
120012891
NCBI-ProteinID:
XP_038720368
LinkDB
All DBs
Position
13:1674029..1696846
Genome browser
AA seq
1929 aa
AA seq
DB search
MAAPSKKSQKRNSTDGGRKFNKSSKKAFKPSKERNDSVQSKAMALQFEDDVPDFPRGRGS
SLSQRECEEIHAEVDAEFGAESNKSKKNKRMKIQKKTASPGDDLGSLFGNGITGKLPRFA
NKITLKNISPGMKLWGVVAEVNEKDLVISLPGGLRGLVRTTDALDPVVDDEIEESEGSVF
PDIFHVGQLVSCTVLQVDDDKKENGKRKIWLSLRLSLLHKGFTLDAIQEGMVLTAYVRSV
EDHGYILHFGPPSFMGFLPKNSQADSKGVEVKTGKLLQGVVRQIDKTRKVVYLSSDPETV
SKSVTKDLKGISIDLLVPGMMVNARVQSTLENGIMLSFLTYFTGTVDMFHLQNTVPSSNW
KVDYIKNKKVNARILFVDPLTRAVALTLNPHLVHNRASPSLVKIGDIYDHSKVVRVDRGS
GLLLEIPSTPVSTPAYVSISDVAEEEVKKLEKKFKEGSNVRVRILGFRHLEGLATGVLKA
SAFEGPVFTHSDVKPGMLVRAKITAVDSFGAIVQFPGGVKALCPLRHMSEFEIAKPGKKF
KIGAELMFRVLGCKSKRITVTHKKTLVKSKLGILGSYTDATEALRTHGWITKIEKHGCFV
HFYNGVQGFAPRSELGLDPGSEPSSMYHVGQVVKCRILSSIPASRRITLSFLMKPTRVSE
DDAVKLGSLVSGVVDKVTPSAVIVCVSSEGRLKGSISTEHLSDHLELATSIKSVLKPGYE
FDQLLVLDIESNNLILSAKYSLVNSAQDIPSDPSQIRPQSVIHGYICNIIETGCFVRFLG
RLTGFSPKSKAMNDQRSSLFEAFHIGQSVRANILDVNNETGRITLSLKQSCCSSADASFL
QEFFLLEEKIARLQSSDSKRSELKWVRGFDVGSVIEGKIQEAKEFGVVVSFEKYNDVFGF
ITHYQLGGTAVEKGSLVRAVVLDIAKAEFLVDLSLKPEFFDKSGGGMSDSRSEKKKRKRE
ASKELEVHQTVNAIVEIVKEKYLVLSIPEYDYAIGYASVFDFNIQTFPHKQFQNGQSVTA
TVMALPNPSSSGRLLLLLNSISEATETSSLKKAKKKSSYCVGSLVQAEITEIKPLELRLK
FGIGFHGRIHITEVNDGNALEDPFSNFRVGQTVTARILAKANQSDNKRSYLWELSVRPKM
LTGSYDLEDELMDEKLKFLAGECVSGYVYKVDNEWAWLTVSRHVKGQLNILDSSFEPTEL
QEFQKRFYVGKAVSGHVLNFNIEKKLLRLVLRPVCGVSGGPLGGEDSKVDVPNNNVFNEQ
NTSHIHEGDIVGGRILKILPGVGGLIVQIGPHLHGRIHFTELKDSWVSDPLSGYHEGQFV
KCKVLEISRTVKSTVHIDLSLRLSLDGMLSQNKNDLPDHVDTPFKHLEKIDDLHPNTIIQ
GYVKSITSKGCFILLSRKLDAKILLSNLSDGYIEDLEKEFPVGKLVTGRVISVEPLSNRV
EVTLKTLNGSSASKSEINDLSCVHVGDIISGRIRRVESYGLFITIDNTSMVGLCHVSEIS
DEHIDNLEAKYRSGEKVTAKILKVDEERRRISLGIKSSYLRDSSEIHSSEQEFDKGNGSV
EDGDVESLMHTRSSSPEIQIMGIDGNEECTVLAQAESRSFIRPLEVILDDIEDSDVHIVA
SQNQGHIDTVDGKERRQAKKKAKEEREQEIRAAEERLLEKNVPTTADDHEKLVRSSPNSS
LVWMKYMAFVLSLADVEKARSIAERALRTINVREENEKLNIWVAYFNLENEFGNPPEEAI
MKVFNRALQCCDPKKIHLALLGMYERTGQNKFADELLDKMIKKFKHSCKVWLRRVRSLLT
QQQDRVQSVVQRALLSLPRHKHIKFISQTAILEFKCGVPERGRSLLEGILREYPKRTDLW
SIYLDQEIRLGDVDVIRALFERAISLSLPPKKMKFLFKKYLEFEKSSGDEKQVEYVKQKA
MDYVQSTLT
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccttctaagaaatctcagaagagaaactccacagacggtggtcgtaagttc
aacaagtcttccaagaaggccttcaaaccaagtaaggaaagaaacgattccgttcaatct
aaggcgatggcattgcagtttgaagacgacgttcctgactttcctagaggcaggggcagt
tccttgagccaacgtgaatgtgaggagattcatgcagaagttgatgcagaatttggggct
gagtcaaataagtcgaagaagaacaagaggatgaagattcagaagaagactgcatctcca
ggagatgacctgggctcgcttttcggcaatggtatcactggaaaactacctagatttgct
aataagataactctgaagaatatttctcctgggatgaagctttggggagttgttgctgag
gtgaatgagaaggaccttgtaattagtcttccaggaggcttgcgtggattagttcgtaca
actgatgcacttgatcctgtcgtagatgatgaaattgaggagagtgaaggtagtgtattt
ccagacatattccatgttgggcagcttgtttcttgcactgtgctgcaagtggatgatgac
aagaaagaaaatgggaaacggaagatctggctttctttgcgtctctctttgttgcacaaa
ggcttcaccttggatgcaattcaagaaggaatggtccttacagcatatgttagaagtgtt
gaagatcatggttacatacttcactttggaccaccttcttttatggggtttcttccgaag
aacagccaagctgatagcaagggggttgaagtgaagactgggaaacttttgcaaggagtt
gttagacaaattgataaaactcggaaagttgtttatctgagttctgatccagaaacagtg
tctaaatctgttacaaaggatcttaagggcatttcaattgatcttcttgtcccgggcatg
atggttaatgcacgcgtacagtcaacccttgaaaatgggataatgttatcattccttact
tactttactggaactgttgatatgtttcatttacaaaataccgtacctagctcaaattgg
aaggttgattacattaaaaataaaaaggtcaatgctcggatattatttgttgatcccttg
acaagagctgttgctttgaccctgaatccacatcttgttcataatagggcttctccttca
cttgttaagataggagatatttatgaccattcaaaagttgtcagggtagatagaggatca
ggtcttctgcttgagattccttctacaccagtgtcaactccggcttatgttagcatatct
gatgtggctgaagaggaagtcaagaagcttgagaaaaagtttaaggaagggagtaatgtt
cgtgttcgaattcttgggtttaggcacttggaagggcttgctacaggggttttgaaggcc
agtgcttttgaaggaccagtgttcacccactctgatgtgaagcctgggatgttggttagg
gctaaaatcacagctgttgacagctttggagctattgtgcaatttcctggtggtgtaaag
gcactttgtccgctccgacatatgtctgaatttgaaattgcaaagcctggaaaaaaattt
aagattggagctgaactcatgttccgcgtgctgggatgcaagtccaagagaataactgta
acacataagaaaacacttgtaaaatcaaaacttgggatcttgggttcatatactgatgca
actgaagcactgagaacgcatggttggattacaaagattgaaaagcatggctgttttgtc
cacttctacaatggagtccaaggatttgctcccagatctgaactcggattagacccaggg
tcagagccgagttcaatgtatcatgttggacaagtcgtcaaatgcagaatactgagttcc
attcctgcttcgaggcggatcaccctcagtttcttaatgaagcctacaagggtttccgaa
gatgatgcggtcaagttgggtagtcttgtttcaggtgttgttgacaaggtgaccccttct
gcagtaattgtatgtgttagttcagagggtcggttgaagggttcaatctcaactgaacat
ctgtcagatcatcttgaacttgctacttctataaagtcagttttgaaacctggatatgag
ttcgatcagctgttggtattagatattgagagcaacaatttgatactctctgcaaaatat
tctttggtcaactcggctcaagatattccttcggatcccagtcagattcgtcctcagtca
gtgatccatggttatatctgtaacataattgaaactggctgcttcgtccgcttccttggg
cgtttaaccggattctcccctaaaagcaaggctatgaatgaccaacgatcttctcttttc
gaggcctttcacatcggacaatctgttcgagctaatattcttgatgttaataatgaaaca
ggtagaataacactttctttaaagcagtcatgttgctcatcagcagatgcatccttcctt
caagaattctttctgttggaggagaagattgctaggctgcagtcttctgactccaaaaga
tctgaattgaagtgggtcagaggatttgatgttggtagtgtcattgagggcaaaattcag
gaggcaaaggaatttggagttgtcgtcagctttgaaaagtacaatgatgtttttggtttt
attacacattatcaattaggtggaactgctgtggaaaaaggctctcttgttcgagctgtg
gttcttgatattgccaaggcagaatttctggttgatttatctctgaagccagagtttttt
gataaatccggaggaggaatgtctgacagccggtctgagaagaagaaacgtaagagagag
gcatccaaggaattggaggtgcatcagactgtaaatgcaattgtagagattgtgaaagag
aaatacttggttctttcaatacctgagtatgactatgcgattggttatgcctccgtattc
gacttcaacattcaaacatttcctcataaacagtttcaaaatggacagagtgtaactgca
actgttatggccctgccaaacccttcaagttcagggaggttgcttttactccttaattcc
attagtgaagcgaccgagacatccagtttgaagaaggccaaaaagaagtctagctattgt
gtgggatcgttggttcaggcagagataactgaaattaagcctcttgaactgagattgaaa
tttggaattggtttccatgggaggattcatataacagaggtaaatgatggtaatgcattg
gaagatccatttagtaacttccgggttgggcaaacagtgactgcaagaattcttgcaaag
gctaatcagtcggataataagaggagttacctatgggagttatccgtcagaccaaaaatg
cttacaggatcctatgatctggaggacgagcttatggatgagaagttgaagtttttggct
ggagaatgtgtcagtggttatgtatataaagtggacaatgaatgggcctggttaacggta
tctcgacatgttaagggacagttgaatattcttgacagttcatttgaacctactgaactt
caagaattccagaagcgcttttatgttggaaaggctgtttctggccatgttctaaatttc
aacatagagaagaagctactccggttggttcttcgtcctgtatgtggtgtctctggtgga
cctttaggtggtgaagattctaaggtggatgttccaaacaataatgttttcaatgagcag
aatacttctcatattcatgaaggagatatcgtgggtggcagaattttgaaaatacttcct
ggtgttggaggattgattgtccaaattggtcctcatttgcatggtaggatccacttcact
gaacttaaagactcatgggtgtcagacccattatctggatatcatgagggacaatttgta
aagtgcaaggttctggaaataagtcgaacagtcaagagcactgttcacattgacctgtca
ttacgtttatctctagatggcatgctcagtcagaacaagaatgacttgcccgaccacgta
gatactcccttcaaacatttggaaaagatagatgatcttcatcccaatacaataatacag
ggttatgttaagagtattacctcaaaaggatgcttcattttactttcacggaagcttgat
gccaaaattctcctctcgaatttatcagacggatatattgaggatcttgaaaaagaattt
cctgttgggaaacttgttactggcagggtaatttccgtagaaccgttgtcaaatcgtgtt
gaagttacattgaagacattgaatggtagcagtgcatcgaaatctgaaattaatgattta
agttgcgtacatgtgggggacatcatttctggcaggattaggcgggtggagtcatatgga
ttgtttataacaattgacaatacaagcatggttgggttatgccatgtgtctgaaatttca
gatgaacacatcgacaatctggaagcaaaatatagatcaggggagaaagttacggccaag
attttgaaggtggatgaggaaagacgtcggatctctcttggaataaaaagttcatatttg
agggacagtagtgaaatccattcatctgaacaagaatttgacaaaggcaatggctctgtt
gaagacggagatgttgagtctttaatgcatacccgcagcagctcacctgagattcagatt
atgggtatagatggaaatgaagaatgcacagttcttgcacaagcagaatcaaggtctttc
attcgtccacttgaggtcatacttgatgacattgaagactcagatgtgcatattgtagct
agtcaaaaccaagggcatattgatacagtagatgggaaggagagaagacaagcaaagaaa
aaagcgaaggaagagagggagcaagaaatcagagctgctgaagaaagactgttggaaaaa
aatgtcccgacaactgctgatgatcatgagaaactggttagaagctctcctaatagcagt
ttggtttggatgaagtacatggcctttgtactctctttggctgatgttgagaaagctcgt
tctattgctgaaagggccctgaggacgataaacgttcgagaagagaatgagaagcttaac
atttgggtggcttatttcaatttggaaaatgaatttggaaatcctccagaggaagctatt
atgaaagtgttcaatagagcattgcagtgctgtgatcctaaaaagatccatctggcactc
ttgggaatgtatgaaagaactggccaaaacaagtttgctgatgagcttcttgacaaaatg
atcaagaaattcaaacattcatgcaaggtttggttaaggcgggtgcggagtcttctgaca
caacagcaagatagagttcaatctgttgtacaacgtgctttattgagtcttccccgtcat
aagcatattaagttcatctcacagacagctattttggagttcaaatgtggagttccagaa
agaggacgatccttgcttgaaggaatattgcgggagtacccaaagagaacggacttgtgg
agcatttatcttgatcaagagatccgacttggagatgtggatgtaattcgtgcactgttt
gagagggcgattagcctgagccttcctcctaaaaagatgaaattcttgttcaagaagtat
ctcgagtttgagaagtctagcggtgatgaaaaacaggttgaatatgtgaaacagaaagcg
atggactacgttcagagcacactaacttga
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integrated database retrieval system
