Tripterygium wilfordii (thunder duke vine): 120012931
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Entry
120012931 CDS
T07256
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00906
Carotenoid biosynthesis
twl01100
Metabolic pathways
twl01110
Biosynthesis of secondary metabolites
Module
twl_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
120012931
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
twl01006
]
120012931
Enzymes [BR:
twl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
120012931
Prenyltransferases [BR:
twl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120012931
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
120012931
NCBI-ProteinID:
XP_038720427
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All DBs
Position
13:4618927..4623296
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AA seq
424 aa
AA seq
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MSVALLWVVSPTTTTTTTTDVSKCFGFIDSSKFFVKDRRLMLNGAAKKSRRQNWNYCSPD
ADFRSGSNFPVTSSVVASPAGEMAVSSEEKVYSVVLKQAALVEKQLRSRGDLDVKPDIAI
PGTLSLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNAS
HITPTALDRWEARLEDLFQGRPFDMLDAAVSDTVTKFPVDIQPFKDMIEGMRMDLRKSRY
KNFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESVYNAALALGIANQLTNILRDVGE
DASRGRIYLPQDELALAGISEDDIFAGRLTNKWRNFMKSQIKRARMFFDEAEKGVTELSA
ASRWPVWASLLLYRQILDEIEANDYNNFTRRAYVSKAKKLLALPVAYTRSLIRPSRTALA
SNKM
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgctttactatgggttgtctcacctactactactaccacaacaacaacagat
gtctccaaatgttttgggttcattgattcgtcaaagttctttgttaaagataggagattg
atgcttaatggtgctgcaaaaaagagtaggagacagaattggaattattgctctccagat
gcagatttcagaagtggaagcaacttccctgtaacatcaagcgtggtggctagcccggct
ggagaaatggctgtctcgtctgaggagaaggtttatagtgtcgtgttgaagcaggcagcc
ttggttgagaagcaattgaggtctagaggggatctagatgtgaaaccagatattgccatt
ccagggactttgagcttgttgagtgaagcttatgaccgatgtggagaagtttgtgcagag
tatgcaaagacattttacttgggaactttgctaatgactcctgaaaggcgaagagctata
tgggcaatctatgtgtggtgtaggaggacggatgagcttgttgatgggcctaatgcgtcg
cacataacaccaacagctttagacaggtgggaggcaaggttggaagatctttttcaaggt
cgtccatttgatatgcttgacgctgctgtatcagatactgttacgaaatttcctgttgat
attcagccatttaaagacatgattgaaggaatgaggatggacctaaggaagtcaagatac
aagaacttcgatgaactgtatctttattgttattatgtcgctgggactgtcggattgatg
agcgttccagtgatgggcattgcacctgaatctcaggcaacaacagagagtgtttataat
gctgccttggcattaggtattgcgaatcagctaaccaacatactcagggacgttggagaa
gatgcaagtagaggtaggatatatctaccacaagatgagttggcattggctgggatatcg
gaagatgacatatttgctggaaggttgaccaataaatggagaaacttcatgaagagtcaa
attaagagggcgaggatgttcttcgatgaggcagagaaaggtgtgacagaactgagcgca
gccagtagatggccggtatgggcatcgttgctgttgtatcgtcaaatactagacgagata
gaagctaacgactacaacaacttcacgagaagggcttatgtgagcaaggcaaagaagcta
cttgctttgccggttgcatacacaagatctcttatccgtccatcaagaacagctttggct
tccaacaagatgtga
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