Tripterygium wilfordii (thunder duke vine): 120012973
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Entry
120012973 CDS
T07256
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120012973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120012973
03009 Ribosome biogenesis [BR:
twl03009
]
120012973
04131 Membrane trafficking [BR:
twl04131
]
120012973
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twl04147
]
120012973
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120012973
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120012973
Membrane trafficking [BR:
twl04131
]
SNARE
SNARE associated proteins
Others
120012973
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120012973
Exosome [BR:
twl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120012973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
AAA_18
Parvo_NS1
ATPase_2
nSTAND_NTPase5
Viral_helicase1
ABC_tran
NB-ARC
AAA_7
Vps4_C
NACHT
TsaE
AAA_lid_PRS2_C
IstB_IS21
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
120012973
NCBI-ProteinID:
XP_038720481
LinkDB
All DBs
Position
13:2735508..2740259
Genome browser
AA seq
806 aa
AA seq
DB search
MANQAESSDSKGTKRDFSTAILERKKAANRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQI
FKSCLRKSPVSKDVDLRALAKYTNGFSGADLTEICQRACKYAIRENIEKDIERERRRSDN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD
ASSGGAAASDPFAASAGGADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccaagctgaatcctctgactctaagggaacgaagagagactttagtaccgcc
attctcgagcggaagaaggcggcgaatcgcctggtcgtggatgaggctgtcaacgatgac
aattccgtcgtcgcactccacccggataccatggagaagctccaactctttcgcggagac
acgatcttgatcaagggtaaaaaaaggaaagatacaatctgcattgcccttgctgatgat
acatgcgatgaacctaaaatcaggatgaacaaggttgtgaggtctaacctcagggttagg
cttggggatgttgtttctgtgcaccagtgtcctgatgttaagtatgggaagcgtgtccat
attctaccagtggatgacacaatagaaggggtgactggaaatctatttgatgcatatttg
aaaccgtatttccttgaggcataccgtccagtgaggaagggtgatctttttctcgtgaga
gggggaatgagaagtgtggagttcaaggttattgagactgaccctccagaatactgtgtg
gttgcccctgacacggaaattttctgtgaaggagaacctgtgagaagggaggatgagaac
agattggatgaggttggttatgatgatgttggtggtgttagaaaacagatggctcagatt
cgagagttagtggaacttccattgaggcatccacaactatttaaatcaattggtgtaaag
ccacctaaaggaatccttctgtatgggcctcctggctctggaaagactctaattgcccgg
gctgttgctaatgagactggtgctttctttttctgtataaatggaccagagataatgtca
aagttggcaggggagagtgaaagcaatctcaggaaggcattcgaggaagcagagaagaat
gccccgtcaattatattcattgatgagattgactcaattgcacccaagcgagagaagaca
catggagaagttgagaggaggattgtctcccagctcttgacgctcatggacgggcttaaa
tcacgtgctcatgtcattgttatgggggctacaaatcgtcccaacagcattgacccagct
ttgagaaggtttggaagatttgacagggaaattgatattggtgtaccggatgaagttggg
cgccttgaggttcttcgtattcatacaaagaacatgaagcttgctgaggatgttgacttg
gaaagaatttcgaaggatacccatggttatgtgggtgctgatctggcggctctgtgtacc
gaggctgcactccaatgcatcagggaaaagatggatgtaattgacttggaagatgaaaca
attgatgctgagatactgaactccatggccgtaagcaatgaacacttccagactgctctt
ggaacaagcaatccttctgctttgcgtgaaacagttgttgaggtgccaaatgtcagttgg
gaggacattggtggtcttgagaatgttaaaagggagcttcaagagaccgttcaatatcct
gtggagcatcctgagaaatttgagaagtttggaatgtctccctctaagggagttctgttc
tatggccctcctggttgcggtaaaactcttctggcaaaagctattgcaaatgaatgtcag
gcaaacttcattagcgtcaagggtccggaattgcttaccatgtggtttggagagagtgag
gcaaatgtgcgagaaatttttgacaaggctcgccagtctgccccttgcgtcctatttttt
gatgaacttgactctattgctactcagagagggagcagtgtaggagatgctgggggtgct
gctgacagggttttgaaccagcttctgactgagatggatggcatgtctgcaaaaaaaact
gttttcatcatcggtgcaaccaatagaccagacattatagatcctgcacttcttcgtcct
ggacgtcttgatcagttgatctatatccctctacctgatgaggaatctcgtcttcaaatc
ttcaaatcttgcctgaggaagtccccagtatccaaagatgttgacctcagagcacttgcc
aagtacactaatggattcagtggtgctgatctcaccgagatatgtcagcgtgcttgcaaa
tatgctattagagagaacattgagaaggatattgagagggagaggaggagaagtgataac
ccagaggctatggaggaggatgtagaggacgaagttgcagaaatcaaggcagcacatttt
gaggaatcaatgaagtatgctcgcaggagtgtgagcgatgctgatattcgtaaataccag
gcatttgctcagacattgcagcagtccagaggttttggaactgaattcaggtttgctgat
gcaagcagtggtggagctgcagcatccgaccctttcgctgcctctgctggtggtgctgat
gaagatgacctttacagttag
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