Tripterygium wilfordii (thunder duke vine): 120013054
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Entry
120013054 CDS
T07256
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120013054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120013054
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120013054
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
U-box type E3
120013054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
Neurochondrin
HEAT_2
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
MCAfunc
ARM_LIN_C
KAP
zf-C3HC4_2
zf-C3HC4
TOR1L1_N
Arm_2
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-GeneID:
120013054
NCBI-ProteinID:
XP_038720608
LinkDB
All DBs
Position
2:7388224..7393929
Genome browser
AA seq
664 aa
AA seq
DB search
MEEENKLELVQSLIDTVNEMPSTSDYRSTVKKQYCNMARRLKLLTPMFEEIRESKEAIPE
ETVSALLSLKEALDSAKELLRFGSEGSKIYLVLEREQIMNKFHDVINKLEQALSGISYEN
LDISDEVKEQVELVLTQFRRAKGRADSPNVGLYEDLLSLSNKTNDAATDPAVLRRLSEIL
QLTGIADLTQESLALHEMVAASGGDPGESIEKMSMLLKKIKDFVQTENPNLDGPGREKNL
PPSGSGQLPSEGNVGVPVIPDDFRCPISLELMKDPVIVKTGQTYERSCIEKWLDAGHGTC
PKTQQTLTNTVLTPNYVLRSLIAQWCEANGVEPPKRPSSSRPSKTTSSCSPAERTKIEIL
LCKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIRPLVELLSTSDSRTQEHAVTA
LLNLSICEDNKGSIITSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDDNKVTIGASGA
IPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPILMRLLTEPGGGMVDEA
LAILAVLASHPEGKAAIGAADAVPVLVDVIGNGSPRNRENAAAVLVYLFSADQKYLVEAQ
ELGVMGSLLDLAQNGTDRGKRKALQLLERLSRFVGQQKEAHAQAEAQSQAQQPRPSSTAN
TVDS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagaataagttagagctagtacagagcctgatcgatacagttaacgagatg
ccgtcgacgtccgattacaggtctactgttaagaagcagtactgcaatatggcgaggaga
ttgaagctgttaaccccaatgttcgaggagattagggaaagcaaggaagcgattccagaa
gagaccgttagcgctctgctctctttaaaggaagccttggattctgcaaaggagcttctc
agatttggcagcgaaggcagcaagatttatctggtcctggagagggagcaaataatgaat
aaattccatgatgtgattaataagttggaacaagctttaagtggaatttcctatgaaaac
cttgatatatcagacgaagttaaggaacaggttgagcttgttcttactcagttcagaaga
gccaaaggaagggccgactctccaaatgttgggctgtatgaggatctgttatccctttcc
aacaaaaccaacgatgcagcaacagatccagctgtgctgaggagattgtctgagatattg
caattgacagggatagctgatctcacacaagagtcactagctcttcatgagatggttgct
gccagtggtggagaccccggtgagagtattgagaagatgtcaatgctattgaagaaaata
aaggattttgtgcagactgaaaaccccaacttggatggtcctggaagagaaaagaatctt
cctccaagtggcagtggacaacttccttccgaagggaacgtcggggttccagttatacca
gatgattttcgatgtccaatatccctggagttgatgaaggatcctgttattgttaaaact
gggcagacctatgagcgttcctgcattgagaagtggctggatgcgggacatggcacatgc
ccaaagacgcagcagactctcaccaatactgttcttacacccaactatgtgcttcgtagc
ctcatcgcccagtggtgtgaggccaatggcgtcgaaccaccaaaacgacctagcagttct
cgacccagtaaaaccacatcctcgtgctctcctgctgaacgtactaagattgaaattctc
ctctgcaagctcacatctggtaaccctgaggaccagcggtctgctgcaggtgagatccgc
cttcttgccaaacgaaatgcggataatcgtgttgccattgctgaagctggtgcaatccga
cctcttgttgaactcctttcaacatctgattcccgcacccaagagcatgctgttacagca
cttcttaacctttccatatgtgaagataacaaaggaagtattataacctcgggggctgta
ccaggaattgttcatgtgcttaagaagggaagcatggaagctagggaaaatgctgctgcc
accctttttagcctctctgttgtggacgacaataaggttacaattggtgcctcaggcgcc
atacccccactagtgacgctgctgagtgaaggtacccaaagagggaaaaaggatgctgca
acagcactcttcaatttgtgcatttaccaaggaaacaaaggaaaggcggtaagggctgga
gttgtgcccatattaatgcggctactgacggaacctggaggtggaatggtggatgaggcg
ttggccatactagcagtactggccagccatcctgaagggaaggcagccattggagctgct
gatgcagtgccagttttggttgatgttattggaaatgggtcaccgagaaacagagagaat
gcggctgcagtcctggtgtaccttttttctgcagatcaaaagtatttggtagaggctcag
gagcttggagtcatgggttcactgttggatttggcacaaaatggtacggaccggggaaag
cgaaaagctttacagttgctggagcgattgagcaggtttgttggccagcagaaggaggcc
cacgcacaagccgaggctcaatctcaagcacaacagccacggccatcctccactgcgaat
actgtggatagctga
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