Tripterygium wilfordii (thunder duke vine): 120013102
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Entry
120013102 CDS
T07256
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120013102
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
twl01002
]
120013102
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120013102
Enzymes [BR:
twl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120013102
Peptidases and inhibitors [BR:
twl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120013102
Ubiquitin system [BR:
twl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120013102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
120013102
NCBI-ProteinID:
XP_038720695
LinkDB
All DBs
Position
13:complement(1734458..1747746)
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AA seq
1118 aa
AA seq
DB search
MTMITPPPLDQQEDEEMLVPHSDLVVEGPQPMEVAQVETAATVEHQPVEDPPSMKFAWTI
ENFSRLNTKKHYSDTFVVSGYKWRVLIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFS
LAIVNQIHNKYSIRKDTQHQFNARESDWGFTSFMALSDLYDPSRGYLVNDTVVVEAEVAV
RKIMDYWAYDSKKETGFVGLKNQGATCYMNSLLQTLYYIPYFRKAVYHMPTTENDMPTGS
IPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEEHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
ENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDI
KRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDNIICNVDEKDIAEH
LRIRLKKVQEEKADRKRYKAQAHLFTMIRVARDEDLMEQIGRDIYFDLVDHEKVRSFRIQ
KQTPFNLFKEEVAKEFGIPVQLQRFWIWAKRQNHTYRPNRPLTHEEEAQSVGQLREVTNK
AHSAELKLFLEVELGVDLRPIPPPDKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPI
EILSKLNQMAGFAPDEEIELYEEIKFEPTVMCEHIDKKTSFRLCQIEDGDIICFQKLTPL
ESETEFRYPDVPSFLEYVHNRQMVHFRSLDKPKEDDFSLELSKLHTYDDVVERVARHIGL
DDPSKIRLTAHNCYSQQPKPQSIRYRSLEHLSDMLVHYNQVSSDILYYEVLDIPLPELQG
LKTLKVVFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPNAELRLLEVFYHKIY
KIFPLNEKIENINDQYWTLRAEEIPEEEKNIGPHDRLIHVYHFTKDSAQNQMQAQNFGEP
FFMVVHETETLADVKLRIQKKLQVADEEFSKWKFAFMSLGRPEYLQDSDVVFTRFQRKDV
YGAWEQYLGLEHSDNAPKRAYAVNQNRHTYEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatcactcctccaccgctagatcagcaagaggacgaggagatgctggttccc
cattcagatttggtggtagagggtccgcagccgatggaagtggcacaagtggagactgct
gccactgtggagcatcagccagtggaggatcctccatccatgaaattcgcatggaccata
gaaaatttctcaaggttgaacaccaagaagcactactctgatacattcgtcgtgagtggt
tacaaatggcgggtacttatttttcctaagggaaacaatgtggaccacttgtccatgtat
ttagacgttgctgattccgccacactgccctatggatggagtagatatgcacagtttagc
ttggctattgttaatcaaattcataacaaatactcaattagaaaggatacacagcatcag
tttaatgctagggagagcgactggggctttacttcattcatggctctcagtgatctttat
gatcccagtagaggatatcttgtgaatgatacagttgttgtcgaggctgaggtagctgtt
cgtaagattatggactattgggcatatgattctaagaaagagactggctttgtcggtctt
aagaaccaaggggcaacttgctatatgaactctctcttacaaactctgtattatattcct
tacttcaggaaggctgtgtatcacatgccgacgactgaaaatgacatgcctacaggaagt
attcctttggctcttcagagtttgttctataagcttcaatataatgacaccagtgttgca
acaaaggaattgaccaaatctttcggatgggatacatatgactcattcatgcaacatgat
gttcaagaactcaacagagtgctgtgtgagaagcttgaagataagatgaagggtactgtt
gtggagggaacaatacagcaattatttgagggtcaccatatgaattatattgaatgcatc
aatgtggactacaaatctacgagaaaggaatcattttatgatctccagcttgatgtcaaa
ggctgccgcgatgtttatgcttcttttgataagtatgttgaagttgaacgtcttgagggc
gacaacaaataccatgctgaagagcatggtttgcaggatgctaggaagggtgtcttgttt
attgatttccctccagttcttcaacttcagctcaagcggtttgaatatgattttatgcgg
gatactatggtgaagataaatgatcgctatgaatttcctcttcaacttgacctcgataga
gaaaatggaaagtatttatcgcctgatgcagatcggagcgttcgcaatctttacacactt
cacagtgtcttggttcatagtggaggggtgcatggtggacattactatgcttttatccgg
cctaccctctcagatcaatggtttaaatttgacgatgaacgggtgactaaagaagatata
aagagggcattagaagagcagtatggtggtgaggaagagctgccgcagaccaatcccggc
tttaataatactccatttaaattcacaaaatactccaatgcatacatgcttgtgtatata
cgtgaaagtgacaaggacaacataatttgtaatgttgacgagaaagacatcgctgaacat
ttgaggataaggttgaaaaaggtgcaagaagagaaggcggacaggaaaagatataaagca
caggctcacctttttactatgataagggttgcacgggatgaggacctcatggagcagata
ggaagggatatatattttgaccttgtagatcatgagaaagtccgtagtttccggattcag
aagcagacaccgtttaatctttttaaggaggaggttgccaaagagtttggtataccagtg
caactacagcgtttttggatatgggcaaagcggcagaatcatacctatcggcctaataga
ccgttgacacatgaggaggaagcacaatctgttggacaattgcgggaggtaacaaacaag
gcacacagcgctgaacttaagttatttttggaagtagagcttggggtggatttacgtcct
attcctccacctgacaaaactaaagaggacattctacttttcttcaagctttatgaccct
gagaaagaagaattacgatatgttgggaggctctttgtaaagagtacagggaagccaata
gaaattttatcaaaactaaatcaaatggctggctttgctccggatgaagaaatagaactt
tatgaggaaataaagtttgagcctactgtcatgtgtgaacacattgataagaagacatca
tttcgattatgtcagattgaagatggagacatcatttgctttcagaaattaacacctctt
gaaagtgaaacagagtttagatatcctgacgtgccttcatttttggaatatgtgcacaat
cgccagatggttcattttcgatctttggacaaaccaaaggaggatgatttttctctagag
ttgtcaaagttgcatacctatgatgacgtggtggagagagtggctcgtcatattggcctg
gatgatccttccaaaatcagacttacagctcataactgctactcgcagcaacctaagccc
cagtccatcagatatcgatcactagagcatttgtcagatatgttagtccactacaatcag
gttagctctgatattttgtactatgaagttttggacattcctctgccagaattgcaaggt
ttaaaaactttgaaagttgtgttccatcatgcaacaaaagatgaggttgttattcacaat
attagattacctaagcagagcactgtcggagatgtgattaatgaactaaaaacaaaggta
gagttatctcatccaaatgctgaacttagactgcttgaagttttctatcacaagatttat
aagatcttccctctcaatgaaaagattgagaatataaatgaccagtactggacattgcgg
gcggaggagatccccgaggaagagaagaacattggtccgcacgatcgcttgattcatgtt
tatcactttacgaaagactctgcacagaatcaaatgcaagcacaaaattttggggaacca
ttctttatggttgtccatgaaactgagactttggcagatgttaaattacgaatacaaaag
aaattacaagttgcagatgaggaattctcgaagtggaaatttgcgtttatgtcactgggt
cgtccagagtacctgcaggactctgacgtggtatttactcggtttcagagaaaagatgtg
tatggtgcttgggagcaataccttgggttggagcactcggataatgctcctaagagagcg
tatgcagtaaatcagaaccgacacacatatgagaagcctgttaaaatatacaactag
DBGET
integrated database retrieval system
