Tripterygium wilfordii (thunder duke vine): 120013122
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Entry
120013122 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
120013122
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120013122
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
Helicases
120013122
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
120013122
NCBI-ProteinID:
XP_038720728
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All DBs
Position
13:complement(2885759..2890674)
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AA seq
516 aa
AA seq
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MEKSASFLFAGANFNKKKFASDFDRFKEKKEAGNLADDREPEEVLVSAKKRKRKARGSDM
IGRLRSKKARKGLHIVKDNDESSKRKKELNRQIERDAVFRKKHKIHVSGNDVASPLKNFA
ELSSRYGCESYLLQNIADLGFKEPTPIQRQAIPVLLSGQECFACAPTGSGKTLAFVCPML
MKLKHPSADGVRAVILCPTRELATQTTRECKRVAKGKKFRITLMTRELLRKADFSKLPCD
IIISTPQRLRLAIRKKKIDLSRVEYLVLDESDKLFEIDMLKKIDSIVKACTNPSIVRSLF
SATLPDFVEELARTIMHDAVRVIIGRKNAASDTIKQRLIFAGSEEGKLISLRQSFAESLN
PPVLIFLQNKVRAKELYEELKFDDIRVDVIHSDLSQAQREDSVDNFRAGKTWVLIATDVI
ARGMDFKGVNCVINYDFPDSSLTYIHRIGRTGRAGRGGEAITFYTKKDIPLLRNIANVMV
ASGCEVPSWILVLRKQKWKKHLPRRDSISIRPQDEE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagcgcctcttttttgttcgctggggccaatttcaataagaagaagttcgcc
agcgatttcgacaggttcaaggagaagaaagaggcaggtaatttagctgatgatcgtgaa
ccagaggaagtgttggtgtctgccaagaagaggaagcggaaggcaaggggttcagacatg
attgggagattgaggtccaaaaaagctagaaagggtctgcatattgtcaaggataatgat
gagtcatccaaaaggaagaaggaactaaataggcaaattgagcgggatgcggtcttccgg
aagaagcataagattcatgtgtctgggaatgatgtggcatcccctcttaaaaattttgca
gagctaagctcaagatatggatgtgaatcatatttattacagaatatagcggaccttgga
tttaaagaaccaacaccaattcaaaggcaggctattccagtcctcctctctggccaggaa
tgctttgcttgtgctccaactggatcaggaaagaccttggcctttgtgtgtcccatgctt
atgaaactcaagcacccctcagcagatggcgttagagcagttatcctatgccccacaaga
gaactagctactcagacaaccagagaatgcaaaagggttgctaaaggaaagaaatttcgt
atcactttaatgaccagagagcttttaagaaaggctgatttttcaaaacttccatgtgat
ataatcatttctacaccacaacggttgcggttggctattcggaaaaagaagattgatcta
agcagggtcgagtatcttgttctggatgagtcggacaagctatttgaaattgacatgtta
aaaaagattgattctattgttaaagcatgcactaacccttcaatagtacgctctttgttc
agtgctactttaccagattttgttgaggagcttgctcgaactattatgcatgatgctgtt
cgagttattattggacgaaagaacgctgcttctgacacgatcaagcagcggttaattttt
gctggaagtgaagaagggaaacttatttctcttcgccaaagctttgctgagagtttgaat
ccaccagtgctaatttttcttcaaaacaaagtgcgggcgaaagaactgtatgaggagcta
aaatttgacgacattagagttgatgtcatccattctgatttgtcccaagcacagcgagaa
gattctgttgacaactttagagctggaaaaacatgggttttgattgcgacagatgttatt
gctcgtggtatggatttcaaaggtgtcaattgtgtgatcaactatgattttccagattct
tccttgacttacattcacagaattggccggactggcagagcaggaaggggtggagaggcc
atcacattctacacaaaaaaagatatcccccttttgcgtaacatagctaatgtcatggta
gcttcaggctgtgaggttccatcgtggatcctggtgttgcgcaaacagaagtggaagaag
cacctgccacgaagagattcaatttcaatcaggccacaagatgaggaatga
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