Tripterygium wilfordii (thunder duke vine): 120013239
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Entry
120013239 CDS
T07256
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120013239
09122 Translation
03013 Nucleocytoplasmic transport
120013239
03015 mRNA surveillance pathway
120013239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120013239
03041 Spliceosome [BR:
twl03041
]
120013239
03009 Ribosome biogenesis [BR:
twl03009
]
120013239
03012 Translation factors [BR:
twl03012
]
120013239
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120013239
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120013239
mRNA cycle factors
Stress granule specific factors
120013239
Spliceosome [BR:
twl03041
]
Complex C
Other components
EJC/TREX
120013239
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
Helicases
120013239
Translation factors [BR:
twl03012
]
Eukaryotic type
Initiation factors
eIF-4
120013239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
CMS1
Motif
Other DBs
NCBI-GeneID:
120013239
NCBI-ProteinID:
XP_038720912
LinkDB
All DBs
Position
13:complement(10937484..10941983)
Genome browser
AA seq
414 aa
AA seq
DB search
MAAAAIGSVVPAGRAARRAARRAMEDDKLVFETTPGVDPVMIFDKMGIKDDVLGGIYAYG
FEKPSAIQQRAVMPIIQGRDVIAQAQSGTGKTSMIALTVCQMVDTASREVQVLILSPTRE
LASQTEKVILAIGDYINIQALACTGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLR
TKAIKLLVLDESDEILSRGFKDQIYDVYRYIPPELQVVLISATLPHEILEMTTKFMNDPV
KILVKRDELTMERMEQFFVTVEREDWKFDTLCDLCDNISITRAVIFCNTKRKVDWLTEKM
RSTNFTVSSMHGNMPQKERDAIMLEFRSGATRVLITTDIWAQGLDVQQVNLVINYDLPNN
RELYIHRIGRTGRFGRKGVAINFVKTDEIKILRDIEQYYSTHVEELPMNVADLV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcagcgataggaagcgtggtgccggcggggagggcggcgcggagggcggcg
cggagggcgatggaggatgacaagttggtctttgagacgacgcctggtgtagaccctgtt
atgatattcgataagatgggaatcaaggacgatgtgcttggtggaatctacgcatacggc
tttgagaagccctctgcaatccagcagagggccgtcatgcctattattcagggccgagac
gtcatcgcacaggcacagtccggtactggcaagacctccatgattgctctaactgtttgc
cagatggttgatacagctagccgagaggtccaggtcttgatattgtcacctacgagggaa
ctggcatctcagacagagaaggtaatattggccattggtgattatattaacatacaagca
cttgcgtgtactggtggaaaaagcgtgggtgaggatatcagaaagctagaacatggagtt
catgtggtatccggaactccaggcagggtgtgtgacatgatcaagcggagaactctacgt
accaaagccattaaactattagttcttgatgagtctgatgaaatattgagcagaggtttc
aaggaccaaatttatgatgtatatagatacattcccccagagcttcaggttgtcttgatc
tcagccactcttccgcatgaaattttggagatgacaaccaagttcatgaatgaccctgta
aagatccttgtgaaacgtgatgagttgactatggagcgcatggaacagttttttgttaca
gttgaaagagaggattggaagtttgatactctctgcgacctttgtgataacatttcaatc
acccgagctgttattttttgcaataccaagcgcaaggtggattggttaactgagaagatg
cggagcactaactttactgtgtcatctatgcatgggaacatgccacagaaggagcgagat
gccattatgctagagtttcggtctggggcaacccgtgtcttgatcaccactgatatttgg
gctcagggtctggatgttcaacaggttaatcttgtgatcaattatgaccttccaaacaat
cgtgagctttacatacaccggattggtcgtactggccgttttggacgcaagggtgtggcc
ataaatttcgtcaagactgatgaaatcaagattctaagagacatagagcagtactacagt
acccacgttgaagagctgccgatgaatgttgctgatctcgtataa
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