Tripterygium wilfordii (thunder duke vine): 120013320
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Entry
120013320 CDS
T07256
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120013320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120013320
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120013320
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120013320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-C3HC4_2
cNMPbd_u2
SoxY
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120013320
NCBI-ProteinID:
XP_038721013
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Position
13:complement(15006866..15010204)
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AA seq
322 aa
AA seq
DB search
MAKFSVGAEEDGEGPSNSCRLKRRRSVSPPSPENQSQEEDQTGATSFMLPPESSNCADGV
GSGHIKTSKDVSVIVSLTEPEVLDCAICYEPLTIPVFQCENGHTACSQCCTQLRNKCPSC
SLPIGYNRCRAIEKVLESVRLSCQYNPNGCKETMSYSKKRHHEKICIYSPYPCPFPNCSY
CGSYKQFSVHFKRKHTGSVKHFQYNCTFRIQLHQTSDVRLVLQEDKGDLFVIRNDFEILG
NAVTLRCFAPCSTMERHAYDLEVKTAEGTTLKIHSLAENIQSWEGMPVASGTFLLIPTDF
FRADEYATLSVHIYHKGVGSGL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattctcagtgggtgctgaagaagatggagaaggaccaagcaacagctgcaga
ctcaagaggagaaggtccgtctctcctccttcacctgaaaatcaaagtcaagaagaagat
cagacaggggcaacttcttttatgttaccccctgaatcttcaaactgtgcagacggagtt
ggctctggtcatatcaaaactagcaaagatgtttctgttatcgtctccttaactgaacct
gaagtgcttgattgtgccatttgctatgagcccttgacgattcctgtgtttcagtgtgag
aatgggcatacagcttgctcgcagtgctgcacccagcttaggaacaaatgtccctcctgc
tctttgcctattggctataaccgctgtcgggcaattgaaaaggttctggaatcagtcaga
ctatcatgtcaatacaatcccaatgggtgcaaggaaacaatgtcctacagtaagaagcgt
catcacgagaagatttgcatctattctccatatccatgcccctttccaaattgcagctac
tgtggttcatataagcaattctcagtacacttcaagagaaaacatacaggtagtgtgaaa
cactttcagtacaactgcaccttccgcattcaactacaccaaactagtgacgtccgcctc
gtccttcaagaagataaaggtgacctatttgtcatcagaaatgattttgaaattcttgga
aatgcagtcactctgagatgctttgcaccctgctcaacaatggaacgacatgcctatgac
cttgaggtgaaaacagctgaaggaacaactcttaaaattcactctcttgcagaaaacata
caaagttgggagggcatgcctgttgcttcagggaccttccttctcataccaacagatttc
tttagagctgatgagtatgctacgttatctgtgcacatataccacaaaggtgtcggttct
gggttgtaa
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