Tripterygium wilfordii (thunder duke vine): 120013370
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Entry
120013370 CDS
T07256
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04142
Lysosome
twl04144
Endocytosis
twl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120013370
04142 Lysosome
120013370
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120013370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120013370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twl04147
]
120013370
Membrane trafficking [BR:
twl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120013370
Exosome [BR:
twl04147
]
Exosomal proteins
Proteins found in most exosomes
120013370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
120013370
NCBI-ProteinID:
XP_038721088
LinkDB
All DBs
Position
13:complement(14618740..14632203)
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAANAPIAMKEVLTLPTVGISPQFITFTNVTMESDKFICVRETAPQNSVVIIDMNLPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQIVFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPAKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGS
PERQQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKVPGNENPSVLISFATKTFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSAGGFYAINRRGQVLLATINEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSHLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVATFAERREFDKILIYSKQVGYTPDYLFLLQTILRAHPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEQCEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIES
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLDPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPPRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRAEDATQFLEVIRAAEDANVYHDLVRYLLMVRQKTKEPKVDSELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDDALYEAAKIIFAFISNWAKLACTLVKLKQFQGAVDAARK
ANSVKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKTVHFYLQEHPDLINDVLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYIEEEDYERLRESIEF
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWFNNMIDFAFPYLLQFIREY
TGKVDELVKDKIEALKEVKAKEQEEKDVISQQNMYAQLLPLALPASPMPGMGGPGMGGGF
AQPPPMGGMGMPPMPPFGMPPMGNY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgaacgccccgatcgccatgaaagaagtcttaactctgccaaccgttggg
attagtccgcaattcatcacatttacaaatgttacaatggaatcagataagtttatttgt
gtacgggaaacagcccctcagaatagcgttgtcattatcgacatgaatctgccaatgcag
cctttaaggaggcctattacagcggattcagcgctcatgaatccaaattcaagaatcctt
gctctgaaagctcaactaccgggaactacccaagatcacttgcagatatttaacattgag
atgaaggccaagatgaaatcgcatcagatgcctgaacagattgtcttttggaagtggatc
acaccaaagatgttgggccttgtcacacagacatctgtatatcattggtcaattgaaggg
gattctgaacctgcaaagatgtttgagagaacagcgaatttggcgaacaatcagataata
aactatcgatgtgatcctacagagaagtggttggttttgattggaattgcacctggttca
cctgagcgccaacaattggttaagggaaacatgcaacttttctctgttgatcagcagcgt
agtcaagctttggaggcacatgctgcagcatttgcacaatttaaggtcccggggaatgag
aatccttctgttctcatatctttcgctaccaagacctttaatgctgggcagattacatcc
aagttgcatgtgatagagcttggtgcccagcctggtaagccatcattcacgaagaaacag
gctgatcttttcttccctcctgattttgctgatgactttccggtcgcaatgcaggtatcc
cacaagtacagtttgatttacgtgatcaccaagcttggactactatttgtttatgatttg
gagacagctacagctgtatacagaaatagaattagtccagacccaatattcttgactgca
gaagcttcatcagcagggggtttctatgcaatcaatagacgaggccaggttttactggct
actattaatgaagcaaccattgtaccctttgtcagtggtcaattgaacaatctggaactt
gctgtcaatctcgcgaaaagagggaaccttcctggagcagagaatctggttgtccagcgt
ttccaagaactttttgcacaaacaaagtataaggaagctgctgaacttgctgcagagtct
ccacagggaatccttcgtacacctgacacagttgccaagtttcagagcgttcctgtgcaa
gcagggcaaacaccaccgctgctgcagtacttcggtactcttctcacaagaggaaagctt
aatgcatttgagtcattggaactgtcacaccttgttgtgaaccagaacaaaaaaaatctt
ttggagaattggttggcagaggacaagttggaatgtagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgcactgaaaatatatattaaagctagagcaacaccaaaa
gttgttgctacttttgcagagcggagggagtttgacaaaattttgatatactcaaagcaa
gttgggtacacacctgattatttgtttctcctgcaaactattcttcgtgcacatccccag
ggggctgttaactttgcattgatgatgtcgcaaatggagggaggctgtccagttgattac
aacaccattacagatctttttctacagaggaatttgattcgtgaagcaactgcatttcta
ttagatgttttgaagcctaatctacccgaacacggttatcttcaaacaaaggtcctggaa
attaatcttgtaacttttcccaatgtggctgatgctattttagctaatggaatgttcagc
cactatgatcgtcctcgcattgctcaactatgtgaaaaggctggtctttatgtgcgagct
ttgcaacattactcggagttgcctgatattaaacgtgtcatcgtgaatactcatgcaatt
gagcctcaggcacttgttgaatttttcgggacactttcgcgagaatgggctttggagtgc
atgaaggaccttcttcttgtcaatctgagaggcaatcttcaaataattgtgcaggttgca
aaagaatattgtgagcagttgggtgttgatgcatgcattaagatttttgagcaattcaag
tcatatgaggggctgtactttttccttgggtcatatttgagttccagtgaggatcctgat
atacattttaagtacattgaggctgccgccaagactgggcaaataaaggaggttgagcgg
gttaccagagaatcaaatttttatgatcctgaaaagacaaagaactttctgatggaagcc
aagcttccagatgcacggccattgattaatgtttgtgatcgttttggttttgttcctgat
ctcactcactacttatattccaacaacatgcttcgctatattgaaggttatgttcagaag
gtgaaccccggaaatgctcctttagttgtggggcagctgctagatgatgaatgcccggaa
gattttatcaaaggactgattctctctgttcgttcgttgcttcctgttgagcccctcgtg
gagcagtgtgagaagagaaatcgtcttcgattactcactcagttcttggagcatcttgtg
agtgagggaagccaagatgtgcatgtccacaatgccctgggtaaaattattattgaaagc
aataacaatcctgagcacttcctcacaacaaacccttactatgactcgcgcgttgtgggc
aagtactgtgagaaacgtgatcccactttggctgttgtggcttaccgtagaggacaatgt
gatgatgaactcatcaatgttacaaacaagaactctttgtttaagttgcaagccagatat
gtcgttgaaaggatggatggtgatctctgggagaaggtccttgatccagagaatgaatat
agaagacaactcattgatcaagttgtatctactgctttgccagaaagcaagagcccagaa
caagtctctgcagctgttaaagcttttatgactgctgacttgccccatgaactaattgaa
ctcctggaaaagattgtgctccaaaactccgcattcagtggcaattttaatctacagaac
cttctcatcttgacagctattaaggccgacccacctagggttatggattatattaacaga
ttagataactttgatgggcctgcagttggggaggtagctgtagaagcccaactttacgaa
gaagcatttgcgatttttaagaagtttaatttgaatgttcaggctgttaatgtcttatta
gataacatccgaagcattgaccgtgctgtggagtttgcattccgcgttgaggaagatgca
gtttggagccaggtggcaaaggcccagcttagagaggggctggtgagtgatgcaattgag
tcatttattcgtgcggaagacgctactcaattcctggaggttattcgtgctgcagaggat
gcaaatgtctaccatgacttggtgaggtaccttctaatggttaggcagaaaacaaaggag
cccaaggtagacagtgagctcatctttgcctatgccaagattgataggttgagtgatatt
gaagaatttattctcatgccaaatgtggccaatcttcaaaatgttggtgatcgcttgtat
gatgatgccctatatgaggctgcaaagattatatttgcatttatatcaaactgggccaag
ttggcttgcacacttgtgaagctgaaacagtttcagggtgccgttgatgcagcccgcaaa
gcaaacagtgtgaagacatggaaggaagtttgctttgcttgtgttgatgcagaggagttc
cgtttggctcaaatttgtggactcaacattattgtacaggttgatgatttggaggaggtc
agcgaatattaccagaatagaggatgcttcaacgagttgatctctctcatggagagtggt
ctagggttagaacgcgcacacatgggaattttcaccgaattgggagttctttatgctaga
tatcgtcctgagaagcttatggagcacatcaaattgttctcaacgcgtctcaatatcccc
aagcttatacgagcttgcgatgaacaacagcattggaaggagctaacttatttgtacata
caatatgatgaatttgacaatgctgcgacaactataatgaaccattcccctgaagcatgg
gatcacatgcagttcaaagacgtggtggtcaaagttgctaatgtggagctatactataag
acggtgcatttttacctgcaagaacatcccgatctcataaatgatgttcttaatgtgctt
gcgcttcgtgttgatcatacacgtgttgttgacatcatgcggaaggctggtcacctgcgt
cttgtgaagccatacatggttgcagttcagagcaacaatgtgtcggctgtaaatgaggct
ttgaatgagatatacatagaggaggaagactatgagagattgcgtgaatcaattgaattt
catgacaactttgaccagattggccttgcacagaagattgagaaacacgagcttcttgaa
atgagacgtgttgctgcttatatttacaaaaaagcaggccggtggaagcagtccattgct
ttgtcaaagaaagacaacctttacaaggatgccatggagacagcttcacaatctggtgat
cgtgaacttgcagaggagttgcttgtttatttcattgagcagggcaagaaggaatgcttc
gcgtcatgcctctttgtttgttatgatttaatacgaccagacgttgctctagagcttgcc
tggtttaacaatatgattgactttgcattcccatatctgttgcagtttatccgtgaatac
actggcaaagttgatgaacttgtgaaagacaaaattgaggctctcaaagaagttaaggct
aaagagcaggaagagaaggacgtgatttcacagcagaacatgtatgctcagttactgcca
cttgctttgcctgcgtcaccaatgcctggcatgggaggaccaggaatgggtggtggtttt
gctcagcctccacccatgggaggtatgggaatgcctccaatgccaccttttggcatgcca
cctatgggaaactactga
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integrated database retrieval system
