Tripterygium wilfordii (thunder duke vine): 120013388
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Entry
120013388 CDS
T07256
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120013388
09122 Translation
03013 Nucleocytoplasmic transport
120013388
03015 mRNA surveillance pathway
120013388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120013388
03041 Spliceosome [BR:
twl03041
]
120013388
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120013388
Spliceosome [BR:
twl03041
]
Complex C
Other components
EJC/TREX
120013388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
120013388
NCBI-ProteinID:
XP_038721105
LinkDB
All DBs
Position
13:complement(11386088..11390954)
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AA seq
700 aa
AA seq
DB search
MSSQYPILYNRQIDQWKVIELKEELKRRKLTTWGLKDDLIKRLAEALCIEREDAAKEVDG
GFHLDLNPVVDVKNPELVSVVTETVKGPVDDVTVQVKVNDGAPTXGSRNFRRRCAAASIE
FSRVKEKKIPDHATGLETSNLVTETVVTKVALNGQDMPNFATHGDNGNINIQLENEDPTP
LNEDPKSRLENEDSKSQLENEDSKSQLENEDPKPQLENEDPKPPHEDPMLHSSAAPNYQV
SEVSPLLRSPVNSDSVSTDSVSINEKIELKDNIIDDNVKLELDVVKPEMEGPSSSNLVAV
SGESHPMDVEESHEKQASVEQKDDSNAANEDSIRKNDSAHVGXLEKLNLDRSSGDDSMED
DALETKQIDSKCNDDELGDKSAKNELPVKEESIVDVVGDDLSAAKNDILAESRIHPAMPA
EKRKLDDQEAGGNAEPLKRQHRWKSESLKVPEIQGSNPTLTTTPKDAFQSPGLKRNFSRS
DSSVSEDAPKERVVPPSPKPPTNSLRIDRFLRPFTLKAVQELLGKTGQVTDFWMDHIKTH
CYVTYSSVEEAVETRNAVYNLKWPYNGGRLLVAEFVDPQEVKIRVEAPQGPPHAPAVSVN
IASPPAAITPQPSPSSHQRVSRKQLPSPPPILPPPPPLSNPLPVRERLTVPQLSEKVDPP
IVTLDDLFRKTKATPWIYYLPLSEEQVALKIAARSRATER
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcaatacccgattctttacaatcgtcaaatcgatcaatggaaggtcatagag
ttgaaggaagagcttaagagacgaaaactaactacctggggtttgaaggacgatttgatt
aaacgtttggctgaagcactttgcattgagagggaagatgctgcaaaggaagttgatggt
ggtttccatttggatctcaatcccgtagttgatgtgaaaaatccagaattagtatcagtt
gttactgaaacagtcaagggtccggtggacgatgttactgttcaggtcaaggtcaatgat
ggtgctccaacangtggttcaaggaattttcgaagaaggtgcgcagcagctagtattgaa
ttttctagggtgaaagaaaagaagattcctgatcatgcaactgggttggaaactagcaat
ctagttactgaaactgttgttacaaaagtagcattgaatgggcaagatatgccaaacttt
gcaactcatggggataatgggaatattaatattcagctggagaatgaagatcccacaccc
ctgaatgaagatccaaaatcccggctggagaatgaggattcaaagtctcagctggagaat
gaggattcaaagtctcagctggagaatgaggatccaaagccccagctggagaatgaggat
ccaaagcctcctcacgaggatccaatgcttcattcttctgctgctccaaactaccaggta
tctgaggtcagcccccttttgaggtctccagtaaattctgattctgtttctactgattct
gtgtcaattaatgaaaaaattgaactaaaggataatataattgatgataatgttaaatta
gaactagatgttgttaagcctgagatggagggaccatcatccagcaatcttgttgcagtt
agtggcgaatcacatccaatggatgtggaagagtcacatgagaagcaggcatctgtcgaa
cagaaagatgacagcaatgctgcaaatgaagacagcatcagaaaaaatgatagtgcacat
gtagggtaattggaaaagttaaatttggacagaagctctggtgatgactctatggaggat
gatgcactagaaactaagcaaattgattcgaagtgtaatgatgatgagttgggggacaag
agtgcgaaaaatgaattgccggttaaggaagaaagtattgttgatgttgttggagatgac
ttatctgcagccaaaaatgatatccttgctgagagtaggattcatcctgccatgcctgct
gagaaaaggaaacttgatgaccaagaagcaggtgggaacgcagaacctctgaagaggcaa
cacagatggaaatctgagagccttaaagttcctgaaattcaagggtccaatccaacgctc
accaccacacctaaagacgcatttcaatctcctggtcttaagcgcaatttctctagatcc
gactcttctgttagcgaggatgctccaaaggaacgtgttgttccaccatcaccaaaacct
cctacaaattctcttaggattgatcgttttctgcgaccttttaccctcaaagctgtccaa
gagctactgggtaaaactgggcaagttacagatttctggatggaccacattaagacccat
tgttatgttacttattcttcagtggaagaagctgtggagacacggaatgctgtttataac
ctaaaatggccttataatggtggacgccttctagtggctgagtttgttgaccctcaagaa
gtgaaaattcgagtggaggctcctcaaggtcctccacatgccccagctgtatctgtcaat
attgcttctcctccagctgcaattacgccacagccatcaccgtcctcccatcaacgggtt
tctaggaagcagcttccttctcccccacctatcctcccgcctcctccaccactctctaac
ccgcttccagttagagagcgtctcactgttcctcaactgtcagagaaggtcgatccaccg
attgtaactttggatgatctctttaggaaaacaaaagcaactccatggatttactatcta
ccactgtcagaagaacaagttgccctaaaaattgcagcacgcagcagagccaccgaacgg
tag
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