Tripterygium wilfordii (thunder duke vine): 120013409
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Entry
120013409 CDS
T07256
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03420
Nucleotide excision repair
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120013409
09124 Replication and repair
03420 Nucleotide excision repair
120013409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120013409
03400 DNA repair and recombination proteins [BR:
twl03400
]
120013409
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twl04147
]
120013409
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
120013409
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120013409
TCR (transcription coupled repair) factors
Cul4-CSA complex
120013409
Exosome [BR:
twl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120013409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
120013409
NCBI-ProteinID:
XP_038721128
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Position
13:13805532..13815829
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AA seq
813 aa
AA seq
DB search
MSLPTKRSANATTTATSSSSTSHFVPMKKAKSQAVACSLDSSNRNGLHHRASADDEVVFD
PSSMAIDDDLKPDDRVPPPAANLSRKKATPPQPAKKLVIKLLKGKPTLPTNFEEDTWAKL
KAAIEAIFLKQPNSCDLEKLYQAVNNLCLHKMGGNLYQRIEKECEAHISAALLSLVGQSP
DLVVFLSLVERCWQDICEQILMIRGIALYLDRTFVKQTPNVRSLWDMGLQLFRKHLSLSP
EVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLQCTSEFYAAE
GMKYMQQADVPDYLKHVELRLHEEHERCLLYLDSSTRKPLIATAERQLLEHHISAILDKG
FTTLMDGHRIEDLHRMYSLFSRVNALETLRQALSSYIRRAGQGIVMDEEKDKDMVSSLLE
FKSSLDTIWEESFSNNEAFCNTVKDAFEHLINLRQNKPAELIAKFLDEKLRAGNKGTSEE
ELECTLDKVMVLFRFIQGKDIFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQF
TNKLEGMFKDVELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHE
LNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVILMLFNDAQ
KLSFQDIKDATGIEDTELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFIAQLFR
IKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFP
IKPTDLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctctgccaacgccaccaccaccgccaccagtagcagctca
acctcccattttgtccctatgaagaaggccaagtcccaggcggtggcctgctccctcgac
tcctccaacaggaacggtctccaccaccgcgcttccgccgatgatgaagtcgtctttgac
ccctcttctatggccatcgacgacgatctcaagcccgacgatcgagtccctcctcccgcc
gccaatctctcccgcaaaaaggccacccctcctcagcccgccaagaagcttgttattaag
ctccttaaaggaaaaccaacgctgcccaccaacttcgaggaggatacatgggcgaagctg
aaggctgctattgaagctatattcttgaagcaaccaaactcttgtgacttggagaagctt
tatcaggctgtcaacaatctttgcttgcacaagatggggggaaatctttatcaacgaata
gagaaggagtgtgaagcacatatatctgctgctctgctgtctttggttggtcaaagtcct
gatttggtggtcttcttatctcttgttgagagatgttggcaggatatatgcgaacagata
ttgatgattcgcggtatagccttgtatcttgatagaacatttgtgaaacaaaccccaaat
gtgcgatcattgtgggacatgggcttgcaacttttccggaaacatctttctttgtctccg
gaagttgagcacaaaactgtaactggacttttaagaatgattgagagcgaaagattaggt
gaagcagttgatagaacactcttgaatcatcttttgaagatgtttactgctctaggaatt
tactcagaaagctttgagaagcctttccttcagtgcacttctgaattttatgctgcagaa
ggcatgaaatacatgcagcaagccgatgttcctgactacttgaaacatgtggagttaagg
ttgcatgaagaacatgaaagatgcttactctacctggactcaagtacgaggaagccactt
atagcaactgctgaaaggcagcttcttgaacaccatatatctgccattcttgataagggg
ttcacgacactgatggatgggcatcgaattgaggaccttcataggatgtattcactgttc
tctagggtcaatgcccttgaaactttgaggcaggctcttagttcatacattcgaagagct
ggccagggtattgtcatggatgaagaaaaagacaaggatatggtttcatctctgttggaa
ttcaagtcctctctcgacacaatatgggaagaaagcttttctaataatgaagcattttgc
aacaccgttaaagatgcatttgagcatctaattaatcttcgccagaacaagcctgcagag
ttgattgcaaaatttttggatgagaagctccgtgctggaaataagggtacttctgaagag
gaattggagtgtacacttgacaaggttatggttttattcaggtttattcagggcaaagat
atatttgaagccttctataagaaggatcttgcgaaaaggttattgttgggaaagagtgca
tctatagatgcagagaaatctatgatttccaagctgaagaccgagtgtggcagtcagttc
acgaacaaactcgaaggaatgtttaaggatgttgaattgtcaaaggaaataaatgaatca
ttcaaacaatcatctcaggccaggacaaagcttccctcagggattgagatgagtgtacat
gtcttaacaacagggtattggccgacgtatccacctatggatgtgaggcttcctcatgag
ctgaatgtctatcaggatattttcaaggaattctacttaagcaagtacagtgggaggcgc
ttgatgtggcaaaattcattaggtcactgtgtattgaaagcagagtttcccaagggtaaa
aaggagctggcagtttccctatttcagactgttatcttgatgctctttaatgatgcacaa
aagcttagctttcaagatattaaggatgctacaggtatagaggacactgaattgaggagg
accctgcagtctcttgcatgtggaaaagttcgtgtcctgcaaaagttgcccaaagggagg
gatgtcgaggatgatgattcatttgtgttcaatgaaggatttattgctcaactctttcgt
ataaaggtaaatgcaattcagatgaaagaaacagtagaggaaaacacaagcactactgaa
agagtatttcaggatcgccaatatcaggttgatgctgccattgttcgtataatgaagaca
aggaaagtgctaagtcacacccttctgataactgaactatttcagcagctcaaatttccc
ataaagccaactgatttgaagaaaagaatcgaaagccttattgacagggagtacctggag
cgggacaagaacaacccccaaatttacaattacttagcatag
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