Tripterygium wilfordii (thunder duke vine): 120013473
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Entry
120013473 CDS
T07256
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120013473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120013473
03036 Chromosome and associated proteins [BR:
twl03036
]
120013473
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120013473
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120013473
PBAF complex
120013473
GBAF(ncBAF) complex
120013473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120013473
NCBI-ProteinID:
XP_038721230
LinkDB
All DBs
Position
2:complement(956607..963885)
Genome browser
AA seq
1059 aa
AA seq
DB search
MEDKRRALPPASSSAGTGIQAGEPAQSRRRPGGQKRKLNVLSASNTLSTPSKRVTREKNL
NSHSSIHNGPLTRARQSPNILAYAASGVKFEERPILTAEAALADDERRKASEAESKALEA
ALEAEFEAIKSRDANSHVVPSHCGWFSWKKINVLEECAMPTFFNNKSETQTPDVYLEIRN
WILKKFHSNPNVLIESKDLSELEVGDLDSRQKVLEFLDYWGLINFHPFPQDVAVASTNDD
RTAKIDSFPDKIYCFEAIQPCPPMVPKPKLPNIRTPAMPFGVFPTSAIAEELVRPEGPAV
ELPEYHCNSCSADCSQKRYHCQTQADYDLCTDCFNSGKFGSDMSSSDFILMVPAEAPGVS
GGKWTDQETLLLLEALELYKENWNEIADHVATKTKAQCILHFVQMPIEETFLDSDEDIIA
SSKETADPAASTNDSSVSKDDKETDKGKSRASEDQPSPMEETKPEDACEAKACQETSKTE
NLSNMKVGEQASASAGTGEVKAAHKTGENIALKALREAFGAVGYFPMPGRPLSFAEVGNP
VMALVVFLARLVGSDVANASARSSLKSVSSNSPGLQLATRHCFVLDDPPVDKNEPGASES
AVTDMVDRQTSKVNEEQINTQKEENSTSGLSDRDFCFKKDEKMENSIPKEQKSLISENLK
PAEKLLAEKQSFSCEVVPGNIDEPRNSKLAKDPTLKIMKESDDLASKAEFPPSCVKGHEE
ETALGEHSQPSEVKNVEMLSDMLSLEKDIHGHLATSGSVGEPFLPAETLKDVDKASDSLP
PENNERQLVISSSVMELSQPTEVTKDVDMVSKYLLSEKNGQQSVPSDPAGEPSLPLEAQK
DVDMISDSLSLEKNEYLHPEASNSVIKNGTNAGEDQIKDSKMDRHGCTETKDMQDIDKLK
RAAASAISAAAVKAEVLAEQEEEEIRQLVASMIEKQLHNLETKLALFSEMDSIIMRGKEQ
LERSRHKLFHERGLIIASRLGLPPSSSRAGPPSLPADRNAMNFANSVPRPPLSMTSIRPP
ISRTMGTAPPTSNPFVASAVAGSTVQPSGQDRTPSVVAK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaaaggcgagctctaccgccggcgagctcatctgcgggaactggaattcag
gcaggagagcctgctcagtcccggcgccgaccaggagggcaaaagagaaaattgaatgta
ctatcggcatcgaatactttgtctaccccgtcgaaacgcgttactcgcgagaagaacttg
aattcccactcgtcgatccataacggtcccttgacccgggcgcgccagagccccaacatc
ctcgcttacgctgcttccggagtaaagttcgaggagaggccaatattgactgcagaggcg
gccctggcggatgatgagcgacgcaaggcaagtgaggcggagtcaaaagcactggaggca
gcacttgaagctgagtttgaggcaattaaatctcgggatgctaactcgcacgttgtaccc
agtcattgcggttggttttcatggaaaaaaatcaatgttctcgaggagtgcgcaatgcct
acattcttcaacaataaatctgaaacccagacgcctgatgtttatttggaaattcgcaac
tggatcctgaagaagttccactcaaacccaaatgttctaattgaatcaaaggatctatca
gagcttgaagttggagatttggattcccggcagaaggtcttggaattcttggactactgg
ggtctgattaatttccatccatttccacaagatgtagctgttgccagcaccaatgatgac
agaacagcaaaaatagattctttccctgataaaatttattgctttgaagccattcagcca
tgtccgcccatggttcctaaacccaagttacccaatattagaactccggctatgcctttt
ggggtgtttccaacttctgcaattgctgaagagttggtgaggccagaggggccagcggtt
gagttacctgagtaccattgcaattcttgttcagctgattgctctcagaagcgctaccat
tgccagacgcaggcagattacgatttgtgtaccgattgctttaatagtggaaaatttggc
tccgatatgtcttcatcagattttattctcatggtgcctgctgaggctccaggtgttagt
ggtggaaagtggactgatcaggagactctcctcctccttgaagcattggaactttacaaa
gaaaactggaatgagattgcggaccatgttgccacaaaaacaaaagctcaatgtatttta
cattttgttcaaatgccgattgaggaaactttccttgattctgatgaggatattattgcc
agttccaaggaaactgcagatccagctgcatccactaatgattcttctgtctccaaggat
gataaggaaacagacaagggtaagtctagagctagtgaggatcagccttctcctatggaa
gaaacaaaaccagaagatgcatgtgaagcaaaagcttgtcaggaaacttcaaaaacagaa
aatcttagtaacatgaaagttggtgagcaagcttctgcatcagctggtactggtgaagtc
aaggctgctcataaaactggtgaaaacattgcgttaaaggctcttagggaagcttttgga
gctgttggttattttccaatgcctggaagaccactttcatttgctgaagtgggaaatcct
gtcatggcactggttgtgttcctggcacggttggtaggatctgatgttgctaatgcttca
gcccgcagttctttaaaatccgtgtccagcaattctccaggtctgcagctggccactagg
cattgttttgttttggatgaccccccagttgacaagaatgaacctggtgcttctgaaagt
gctgtcactgatatggtggatagacaaactagtaaagtcaatgaggagcagatcaatacc
cagaaagaggagaactctacctctggtttgagtgacagggatttctgttttaaaaaagat
gagaaaatggaaaattctattcctaaagaacaaaagagtttgatttcggaaaatctcaag
cctgcagagaaattacttgctgaaaagcagtcattttcttgtgaagttgtacctggaaat
attgatgaaccaagaaattcaaagttagcaaaggatccaacactaaagatcatgaaagaa
tcagatgatttggcatctaaggcagagtttcctcctagttgtgtgaaggggcatgaagag
gaaactgcattaggagagcattctcagccttcagaggtaaagaatgtggaaatgttatct
gatatgctctctctggaaaaagatatccacggtcatttggctacatcagggtcagttgga
gagccctttctacctgcagagacattgaaggacgtggataaggcatctgattctctgcct
cctgaaaacaatgagcggcagttggttatatcaagttccgttatggagctgtctcaacct
acagaggttacaaaagatgttgatatggtgtctaaatatttgctttctgagaagaatggg
cagcagtcagtcccatcagatcccgctggagagccctctctacctttggaggcacaaaaa
gatgtagatatgatatctgattccctgtctttggagaagaatgaatatctacatccagaa
gcttcaaattcagtgattaaaaatggaacaaatgccggtgaggatcaaataaaagacagt
aaaatggacaggcatggctgcacagagaccaaagacatgcaggatattgataaattaaag
cgtgcagctgcttctgcaatctcggcagctgcagtgaaggcggaagttcttgcagagcag
gaagaggaagaaatccgacaacttgttgcatcaatgatagagaagcagttacataatttg
gaaaccaagttggctctctttagtgagatggatagcataattatgagaggaaaggagcaa
ttggagaggtcaaggcataagctattccatgagcgtggactgataatagcttcacggctt
ggtttaccaccttcatcatctagggcaggtccgccatcattgcctgccgacagaaacgct
atgaactttgcaaactcagttccaaggcccccactaagcatgacttccatacggccacca
atttcaagaaccatgggaactgcacctcccacttctaacccttttgtagcctccgctgta
gcaggaagtaccgtccagccttcaggccaagatagaaccccttcggttgtggcaaagtag
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