Tripterygium wilfordii (thunder duke vine): 120013573
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Entry
120013573 CDS
T07256
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120013573
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120013573
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120013573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_2
FANCL_C
IBR_1
zf_Tbcl_2
Motif
Other DBs
NCBI-GeneID:
120013573
NCBI-ProteinID:
XP_038721346
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All DBs
Position
13:complement(14224428..14227979)
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AA seq
401 aa
AA seq
DB search
MPKRVLCKFFAHGACLKGDNCEFSHVWKAPPNNICTYYQKGMCAYGSRCRYEHVKASWLE
SAASSSSANPRPSLVSNFNPEFLPPKTASNGVTTLPGSPAVTKAFAPRAKPARNSDPTQH
TILDHGDVLEPRNVNPVDRPLCSFDAAGNCPRGDTCLHIHGDLCSTCGKHCLHPFRPEER
EQHKRTCEKKQKRLEALKHSQEIECSVCMEYVLSKPTVAERKFGLLSECDHPFCISCIRN
WRSSSPSSGVDVNSALRTCPICRKLSYFVVPSVIWYSTQEEKQEIVDSYKEKLSSIDCKH
FNFGNRNCPFGTSCFYKHTVKPGSYMWKYNRPPPSRRPPRRSNIVDMDELYDVFERMMDD
EYLCYAEDFYDGDLTPMEMALLLMHLEIDSDGFSSDEEDVS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagggtcctttgcaagttctttgctcatggagcatgtctgaaaggggataat
tgtgagttttctcatgtttggaaggctccaccaaataatatttgcacatactatcaaaaa
ggaatgtgtgcctatggtagtcgatgcagatatgaacatgttaaagcttcttggttggag
tcagcagcatcatcttcatcagcaaatcctcgtccatctctagtctcaaattttaatcct
gaatttcttcctccaaaaactgcatcaaatggggtaactacacttccgggttctcctgca
gtgactaaagcttttgctcccagggctaaaccagctcggaattcagatcctactcagcac
actattttggaccatggtgatgttctggaacctaggaatgtaaatccagttgatcgtcct
ctctgttcatttgacgcggctggtaactgtcctcgtggtgatacctgtctgcatattcat
ggggacttatgttccacctgcggaaagcattgcttgcacccttttagacctgaagaaaga
gagcagcataagagaacatgtgagaaaaagcagaaacgtctagaggcattaaaacatagt
caagaaattgagtgcagtgtgtgtatggagtatgtactctcaaagcccacagtagctgaa
aggaagtttgggttactatcagaatgtgatcatccattctgtatatcatgcatcaggaat
tggcgtagtagctctccaagctctggagtggatgttaattctgcactcaggacttgccca
atatgtcgtaagctgtcatactttgttgttcccagtgtgatttggtactcaacacaagaa
gagaaacaggaaattgttgatagctacaaggaaaaactcagctcaattgattgcaaacac
ttcaactttgggaacaggaattgtccctttgggactagttgtttttacaagcatacggtc
aagccaggctcatatatgtggaagtataacagaccacctccttccaggcggcctccacgc
agatccaatattgtcgatatggatgagttatatgatgtgtttgagcgtatgatggatgat
gagtacctttgctatgccgaagatttttatgatggagatctaacacctatggagatggca
ttgttactaatgcatctggagattgattccgatggcttctctagtgatgaggaggacgta
tcttaa
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