Tripterygium wilfordii (thunder duke vine): 120013634
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Entry
120013634 CDS
T07256
Name
(RefSeq) beta-hexosaminidase 3-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00511
Other glycan degradation
twl00513
Various types of N-glycan biosynthesis
twl00520
Amino sugar and nucleotide sugar metabolism
twl00531
Glycosaminoglycan degradation
twl00600
Sphingolipid metabolism
twl00603
Glycosphingolipid biosynthesis - globo and isoglobo series
twl00604
Glycosphingolipid biosynthesis - ganglio series
twl01100
Metabolic pathways
twl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120013634
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120013634
00513 Various types of N-glycan biosynthesis
120013634
00531 Glycosaminoglycan degradation
120013634
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120013634
00604 Glycosphingolipid biosynthesis - ganglio series
120013634
00511 Other glycan degradation
120013634
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120013634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
twl03110
]
120013634
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
120013634
Chaperones and folding catalysts [BR:
twl03110
]
Intramolecular chaperones
Others
120013634
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Msg2_C
Motif
Other DBs
NCBI-GeneID:
120013634
NCBI-ProteinID:
XP_038721444
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All DBs
Position
13:complement(2013105..2017052)
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AA seq
542 aa
AA seq
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MIRGVDKMQRFWCVVVAVAVVVTEAEAKAFDQVYDKDLHIWPMPKSATYGELDQKAYISN
DFELRRGGGSKYSDKDGILRHGFTRFLDVVRMGHAVDSSFTAPTDSHLLKGINFVISSPN
DELQYGVDESYKLSIPAPGGEPYAQLEAQTVYGALHGLQTFSQICQFDFVTRVIEIRKVP
WSIMDQPRFSYRGLLIDTGRHYLHLVTIKKIIDSMAYAKMNVLHWHTVDSQSFPLETTSY
PALWKGAYSKLERYTMADAAEIVSYAQRRGINVMAEIDLPGHSRSWGTGYPDLWPSENCP
EPLDISKEHTFELINGTISDFSKVFKFKFLHLGGDEVDTSCWTNTPHVRKWLEEKGMNEL
QAYQHFVLRVQNIALSHGYEVVNWQETFNKFGDKLNKKTVVHNWLEGVAAQRVVAAGLRC
IVSNMDAWYLDFVKTPWQNFYANEPLNNIKDPKLQKLVLGGEVCMWGERVDGSDIEQTVW
PRAAAASERLWTPLEKLAKDPNQVTERLEYFRFLLNQRGVAAAPLDGLGRAVPEKPGSCF
VQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtggggtagataaaatgcagaggttttggtgtgtggttgtggctgtggcggtg
gtggtgacggaggcggaggcaaaggcattcgatcaagtgtatgataaagatttgcatata
tggcctatgccaaagtcagcgacgtatggagaattagaccagaaagcttacataagcaat
gattttgaattgagaagaggtggagggagcaagtacagtgacaaagatgggattctgaga
catggtttcactcggtttcttgatgttgtgaggatgggtcatgcggttgactctagcttt
actgctcctactgattcccacttgctcaaggggattaacttcgtcatctcctctccgaat
gatgagttacaatatggagttgacgagtcatacaagctatcaatccctgctccaggggga
gaaccttatgcacaacttgaggctcagacagtctatggggctctacatggacttcagaca
ttcagccagatatgccagtttgactttgtgacccgagtaattgaaattcgtaaggtccca
tggagtattatggatcagccaagattctcttacaggggtctattgattgatacaggccga
cactatcttcacctggtaacgattaagaaaataattgattcaatggcatatgcaaaaatg
aatgttctgcactggcacactgtagattcacaatcttttccattggagacaacttcatat
ccagcactttggaagggtgcatattcgaaattagagcgatataccatggctgatgctgct
gaaattgtgagttatgctcagagaagaggaattaatgtgatggctgaaattgatcttcca
ggacattcccgttcatggggcactggctatcctgatctatggccatcagagaactgtcca
gagccacttgatatcagcaaggagcatacttttgaattgataaatggcactatttctgat
ttcagtaaggtctttaaattcaaatttcttcacttgggaggtgatgaagttgatacaagt
tgctggacgaacactccccatgtaagaaaatggttagaagagaagggtatgaatgaactc
caagcttatcagcattttgtcttgcgagtacagaacattgctctttcccatggatatgaa
gtggtgaactggcaagagacattcaacaaatttggcgacaaattgaacaagaagactgtg
gtgcacaactggcttgaaggtgttgctgcacagcgtgtggttgcagctgggttacggtgc
atagtaagcaatatggatgcgtggtatctggactttgtaaaaacgccatggcagaatttc
tatgcaaacgagccactcaacaacatcaaagaccccaagctacaaaaattagtacttggg
ggtgaggtatgtatgtggggtgaacgtgttgatgggtcagatattgaacagactgtatgg
ccacgggcagcagcagcttcagagcggctatggacacctttagaaaagctggctaaagat
ccaaaccaagttactgaaagattggaatacttcaggtttctgctgaatcaaagaggggtc
gcggcagctccattagacggactaggtcgagctgtgcctgaaaagccaggttcttgcttt
gtacaataa
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