KEGG   Tripterygium wilfordii (thunder duke vine): 120013805
Entry
120013805         CDS       T07256                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:twl04812]
    120013805
Cytoskeleton proteins [BR:twl04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     120013805
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 eIF2A WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_NWD2_C PROPPIN PAN2_N
Other DBs
NCBI-GeneID: 120013805
NCBI-ProteinID: XP_038721667
LinkDB
Position
13:complement(10266131..10278808)
AA seq 792 aa
MTTKRAYKLQEFVAHSASVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVCFDSSEVLVAAGAASGTVKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWIVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQIECIDFHPHEFLLATGSADRTVKFWDLETFELIGSSSPETSGVRCLTFNPDGR
NLLCGLHEHLKVFSWEPVRCHDAVDVGWSKLSDLNVHEGKLLGCSYNQSCVGIWVVDISR
IEPYAVNDMDRLDGLSESKSSSSGNLSILNENTTKGSLGRLSTSENSDSLVKETKSLGRL
SVSQNSDPVKESKISPSTGSIPGTPQRINPNTASKTNLASSTAVSNATAPKKNSTKAHSA
VNVPIFNKSDVVPVIVPRTNAKFEQPAESRKVIGLPGRTMPFSLQSKTTGFRKFANSRDE
MDQPTISAASETPDPKVSDSNSAADKNTFSTVKTLIHGVTEASRNIKDDKYISSGKHETS
SEPDQDESYDTNTHRGNRNVESQKGRTRSVVINLQRRRRSPNYEGPTSGVSPETVSEVNM
LPSNMRRHSPFTEKEAASASDEDAIADVMEEHEQFVSSMQSRLIKLQVVYRYWERNDIKG
AIAAMEKMSDYSVLADVISILTEKIDVVTLDICACLLPLLTTLLESNVDRHLSISLGILL
KLVRIFGSRIYSTISASTSVGVDIEAEQRFERCNLCFLELEKVKRCLPTFTRRGGSIAKS
AQELNLVLQEVS
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgactaccaaacgtgcttataagctacaggaatttgtggctcactctgccagtgtaaat
tgcctcaaaattggaaggaagtcctccagggtactggtcactggaggagaagatcacaag
gtcaatctctgggcaattggcaaacccaatgccattttgagtctgtcgggacatacaagt
ggaattgattctgtgtgctttgattcatctgaagtattagtagctgctggtgctgcaagt
ggtacagtcaagctttgggatctagaggaggcaaagattgttcgcacactaactggacat
agatccaattgcatatctgttgatttccacccatttggagagttctttgcctctggttcg
cttgatacaaatcttaagatatgggatatcagaaagaagggctgcatccacacttacaag
ggtcacacacgaggggtcaatgcaatcagattcaccccagatggtcgctggattgtatct
ggtggggaagacaatactgtgaagctgtgggaccttactgctgggaagctgctacatgat
ttcaagtgtcatgagggccagattgaatgcatagattttcatccccatgaattccttttg
gcaacaggttctgctgaccggactgttaagttttgggaccttgaaacttttgagctaatt
ggttcatcttcccctgagacctctggagtgcgctgcttaacctttaatcctgatgggagg
aatcttctatgtggcttgcatgaacatctaaaggttttctcatgggaaccagttagatgc
cacgatgctgtggatgttggatggtctaaattgtcagatcttaacgttcatgagggcaag
cttcttggctgctcatacaaccaaagttgtgttggcatttgggttgtagacatttcgcgt
atagaaccatatgcagttaatgacatggatcgattggatggtctttccgaatcgaagtcc
agttcaagtggaaatctttcaattttaaatgagaacactacaaagggtagtttgggaagg
ttgtctacttcagaaaattcagactctttggtgaaggaaacgaaatctcttggaaggttg
tcagtttctcagaattcagatcctgttaaggagtcaaaaatttctccatccacaggaagc
atacctggtacacctcaaaggatcaatccaaacactgcttcaaagacaaatctggctagt
tcaacggctgtctccaatgctacagccccaaagaagaattccacgaaagcccactcagca
gttaatgttccaattttcaacaagtcagatgttgtacctgtgatcgtacctagaactaat
gcgaaatttgagcagccagctgaatctagaaaagtaattgggcttcctggtagaactatg
cccttttctttgcagtcaaagacaactggttttcgaaagtttgcaaatagcagagatgag
atggaccagccaacaatatctgctgcatctgaaaccccagatcctaaggtatctgattca
aacagtgctgcagacaagaataccttttctacagttaaaaccttgattcatggagtaaca
gaggcatcaaggaacattaaagatgataagtatattagttccggcaagcacgaaacaagt
tcagagccggatcaggatgaaagttatgatacaaacactcatagagggaacagaaatgtg
gaaagccaaaaaggaagaacacggtcagttgtcataaacttgcagagaaggcgaagatca
cccaactatgagggacccacatctggtgtctcaccagagacagtttctgaagttaacatg
ctcccttcaaacatgagaagacactctccatttaccgaaaaagaggcagcatctgctagt
gatgaggatgctattgcagatgtaatggaagaacatgagcaatttgtcagctccatgcag
tcccgattaatcaagttacaggtagtctatagatattgggaaagaaatgatattaagggg
gccattgctgcaatggagaagatgtctgattattctgtccttgctgatgtaataagcatt
ttaactgagaaaattgatgtcgtcacattggatatttgcgcctgtcttctgccacttctt
actacccttcttgaaagtaatgtggataggcatttgagcatctctttgggcatattgctt
aagctagtaaggatttttggttcgaggatctactcaacaatatcagcatccacatctgtt
ggtgtggacattgaggcagagcaaaggtttgagcggtgcaatctatgtttcttagagctt
gaaaaggtcaaacgctgtctacccacttttaccagaagaggcgggtcaattgcgaagtct
gcccaggaattgaatctagttcttcaagaagtgtcctga

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