Tripterygium wilfordii (thunder duke vine): 120014357
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Entry
120014357 CDS
T07256
Name
(RefSeq) squalene synthase 1-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00100
Steroid biosynthesis
twl00909
Sesquiterpenoid and triterpenoid biosynthesis
twl01100
Metabolic pathways
twl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120014357
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
120014357
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
twl01006
]
120014357
Enzymes [BR:
twl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120014357
Prenyltransferases [BR:
twl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120014357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
120014357
NCBI-ProteinID:
XP_038722218
LinkDB
All DBs
Position
2:complement(629365..636346)
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AA seq
412 aa
AA seq
DB search
MGSLWTMVKHPDDVYPLFKLKMAAKQAEKQIRPQPHWAFCYTMLLKVSRSFALVIQQLGP
QLRDAVCIFYLVLRALDTVEDDTSIPTDVKLPILKAFHQHIYDRDWHYSCGTKEYKVLMD
QFHHVSTAFLELGKGYQEAIEEITQRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSVKSVQCLNDMVTNALIHAEDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTRTMPDVYGAFFDFSSMLMSKVDKNDPNAVKTLSRL
EAIQKTCSESGVINKRKTGIVNGESKYAPLLLVILFIVLGIFIANMSLGLAK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgtggacgatggtgaagcatcctgacgatgtttaccctctgtttaagctg
aagatggcggcgaagcaagcggagaagcagatccggccgcagcctcactgggccttctgc
tacactatgctccttaaagtctcccggagcttcgctctcgtcattcaacagctcggtccc
cagcttcgcgacgctgtctgcatattttatttggttcttcgagccctggatactgttgag
gatgacacaagcatacctacagatgtgaaattgcctatcctcaaagcttttcatcagcac
atatatgatcgagactggcattattcatgtggcacaaaagagtacaaggtgctcatggac
cagtttcatcatgtttcaactgcttttctggagcttgggaaaggttatcaggaggccatt
gaagaaataacacagcgaatgggtgcaggaatggcaaaatttatatgcaaggaggtggaa
tccattgatgactatgatgaatattgccactatgtagcaggacttgtagggctaggtctt
tccaagcttttccatgcctctggatctgaagatttggcttcagattctctctccaattcc
atgggattatttcttcagaaaacaaacatcattcgtgattatttggaggatataaacgag
atacctaagtcccgcatgttttggcctcgtgagatctggagtaaatatgttaacaaactt
gaggacttgaaatatgaggagaattcagtcaagtcagtccaatgcttgaatgacatggta
actaatgccttgatccatgctgaggattgcttaaagtatatgtctgcgctgcgagatcca
gccatatttcgattttgcgccatccctcagattatggcaattggaacactggcactgtgc
tacaacaacattgaagtcttcagaggcgtagtgaagatgaggcgtggtctcactgcaaaa
gtcattgaccgtacaaggacaatgcctgatgtgtatggtgctttctttgacttttcctca
atgctgatgtccaaggttgacaagaatgatcctaatgcagtaaaaacactgagcaggctg
gaagcaatacagaaaacttgcagcgaatcgggtgtcataaataagaggaaaactggcata
gttaatggcgagtcaaaatatgcccctcttttgttggtcatcctttttattgtattgggc
atctttatcgccaatatgtccctcggactggccaaataa
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