Tripterygium wilfordii (thunder duke vine): 120014475
Help
Entry
120014475 CDS
T07256
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120014475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120014475
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120014475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120014475
NCBI-ProteinID:
XP_038722363
LinkDB
All DBs
Position
14:68437..79064
Genome browser
AA seq
1248 aa
AA seq
DB search
MDSIKPLPEALRSSVRSGVVLFDLTRVVEELVFNSLDAGATKVSVAVGLGTCYVKVVDDG
SGVSRDGLVLLGERYATSKLHDLANVDATIKSFGFRGEALASIADVSLLEIVTKACGRPN
GYRKVMKGAKCLYLGLDDDMKDVGTTVVVRDLFYNQPVRRKHMQSSPKKVLHLIKKCVLR
IALVHSKVFFKVFDIESEDDLLYTRPCASPLSLLMSGFGLKDSKFLHELEYSDGILKLSG
YVSGPYGCHDIKAFQYVYINSRFVCKGPIHKLLNNLGTRTVCLDQWKANRGSLKGKRSTA
QALPAYMLNLLCPHSLYDLTFEPSKTFVEFKDWAPVLYFIEEAVQKLWRGSTYGEPLSHG
ADIFHKDNKWNEADNITSEEEDIRNAYWVENSEFTLKKCGVQNHQTSLYIPSSPLEMQIK
DKNWSLSENHDKLHIWQYHKYAELEQQTDMEFVDQIDYSFQLCGDSLAECAAAVVPKSEN
HLLTSDDDLFLNNSYFMKNRYAASKKFKKYGDGDLFMSRMQNEFRNADPSLIRETEACAS
PYESGEFIKKNTDNYKMPFMQSCTSLGNLLHDKVLFANVGGFKNSIDGFRTKRKRVCSDD
ALNILEVDSIDQSYDFFPRSPWLDEASTAMQLPQLKIDDDYSGDVDLLSRASVKSLPSYI
KPFSNVRGLAANVVAQTGSSSSRHQFADSGWHSVSSDIFQPMPLDFGQYANKSALKISGR
SGEEDNCWNYTDFEQIGCQFDCEAILKSSTMENCSSISRGTGLDFDNTHFRKDLCDKFSP
PHSDLSLDETSLCLNTCPRDYARIEKYGTQRMGFKYEDLTTGHFPKKRARRSHSAPPFCR
NKKKVISLNQYTRMKEPNAHTFCDLHTSAVIFAEANEVKDLRQSLGVLHSSSKLNSVEDL
EFGTRQDDRNIQDVMLETNGLRDDEKFENSHCTCANDVGLFEDFIPKETEESLHYAVKWR
TRPQTTNNGRPNHIHDQNKILEISSGFFHLSGDLLFPKSINKNCLAGARVLHQVDKKFIS
IVAGGTLAVIDQHAADERIRLEELRRKVLSGEGKAVTFLDTEQELVLPEIGYQLLHNYAD
LIKDWGWFCSIHSQGSRSFKKNLNVLHQQPTLITLLAVPCILGVNLTHMDLQEFLEQLGD
TDGASTIPPSVIRVLNFKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTAP
LVNMEAFQKQITKLGALEGDSNKPWHGLCRQEVSLERSAQRLTEARGF
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggacagtatcaagcccttgccagaggctcttcgtagttcggtccgttcaggggttgtg
ttgttcgacttaacgagggttgtggaggagctcgttttcaacagtcttgatgccggcgca
acgaaggtatcagtcgctgtgggtctagggacttgctatgtgaaagtagtggatgatgga
tcaggtgtctctcgggatggattagtgttacttggagaaagatatgcaacatcaaagcta
catgatttggctaatgtggatgccactattaagagctttggctttcggggagaagcattg
gcttcgatagctgatgtctcattgttagaaattgtaacaaaagcttgtgggaggccgaat
ggatatcgcaaggtcatgaagggagccaagtgcttgtatcttggacttgatgatgatatg
aaagatgtaggcaccacagtggttgttcgtgatttgttttacaaccaacctgtaaggagg
aagcatatgcaatccagccccaagaaggtcttgcacttgataaaaaaatgtgttcttcgg
attgccctggtgcattcaaaggtcttcttcaaagttttcgatattgaaagtgaggatgat
cttctctatacccgtccttgtgcttctcctttgtcacttttgatgagtggttttggtctt
aaggattccaaattccttcatgaactggaatacagtgatggcatattaaagctgtctggc
tatgtttctggtccttatggttgccatgatattaaggctttccagtatgtttatatcaac
tcacggtttgtatgcaaaggtcccattcataaattgctaaataacttgggtacaaggact
gtgtgtttggatcaatggaaagctaatagagggtccctaaaaggaaagagaagtacagcc
caagcattgccggcgtacatgttgaatttattatgccctcattccctctatgatttaact
ttcgaaccatcaaaaacatttgttgagtttaaggactgggcacctgtgctttactttatt
gaggaggccgtccaaaaactttggagaggaagtacttatggagaacccttaagtcatgga
gctgatatattccataaggataacaagtggaatgaagctgacaatatcacatcagaagaa
gaagatattcgtaatgcttattgggtggagaactctgaattcacattgaagaagtgtggc
gtgcagaatcatcagacttctctctacattccttcctctcctttggaaatgcaaattaag
gacaaaaactggtctttaagtgaaaatcatgataaacttcacatttggcagtatcacaag
tatgctgagttggagcagcaaactgatatggaatttgttgatcagattgactattctttt
caattatgtggcgattcccttgcagaatgcgctgctgctgtggtcccaaaaagtgagaat
catctgttgacatcggatgatgatctttttttgaataatagttattttatgaaaaatcga
tatgctgcttctaaaaaattcaagaaatatggggatggtgatcttttcatgtcaagaatg
cagaatgagttccgtaacgctgatccaagtttgataagagaaactgaggcgtgtgcatct
ccttacgagtctggcgaatttatcaaaaaaaacacagataattacaaaatgccattcatg
caaagttgtacctcacttggaaacctgctacatgataaggttttatttgcaaatgtaggt
ggctttaagaattcaattgatggcttcaggaccaaaagaaaacgggtttgctctgatgat
gctctcaatatcctagaagtagattccattgaccagagttatgattttttcccgaggagt
ccgtggttggatgaggcttcaactgctatgcagcttccccagctcaagatagatgatgac
tattctggagatgttgatcttctgtcacgagcttctgtaaagtcactcccttcttatata
aagccattttcgaatgtgagaggccttgcagctaatgtggttgctcaaacaggaagctct
agctcacgtcatcagtttgcagattctggatggcattcagtaagctcggacatatttcaa
cccatgccattggattttggacaatatgccaacaaaagtgcacttaaaataagtggtaga
tcaggggaggaagataattgttggaattatactgattttgaacaaataggctgccagttc
gattgtgaagccattttgaagagttccacaatggagaactgcagctcaatttctagaggc
actgggttagattttgataatacccactttcgaaaggatctatgtgataaattttctcct
ccgcattcagatttatcacttgatgagacctcgttatgcttaaatacttgtcctagagat
tacgcacgcatcgagaagtatggaacccaaagaatgggatttaaatatgaagatcttaca
acaggtcattttcctaaaaaacgagcaagaagaagccattctgctccgccattttgtaga
aataagaaaaaggttatttccttaaatcagtacacaaggatgaaagaacccaatgctcac
accttttgtgatttgcatacttcagctgtaatttttgcagaagctaacgaagtgaaggat
ctccgacaatctttgggtgtgctgcattcatcttcaaagctgaattctgtggaggattta
gagtttggcaccaggcaagatgataggaacatacaagatgttatgctagagacaaatggg
ctccgggatgatgagaagtttgagaactcacattgtacttgtgctaatgatgttggtctt
tttgaagattttattccaaaggaaaccgaggaatcattacattatgcggtcaaatggcgc
actagaccacaaactacgaacaacggtaggccaaatcatattcatgatcaaaataaaata
cttgaaatttcctcagggttcttccatctttctggtgatttgttatttcctaaatctatc
aacaagaactgccttgcgggtgccagagttctccaccaggtggataagaagttcatctcc
attgtagctggtggaactcttgctgttattgatcagcatgctgcggatgaaaggattcga
ctggaggaacttcgtcgcaaggtgctatctggggaaggaaaagcagttacctttctggat
actgaacaagagttggtcctccctgaaattggctatcagttactgcacaattatgctgat
ctgatcaaagattggggttggttctgcagcatccactctcaaggttcaaggtccttcaaa
aagaatttgaatgttcttcaccagcagccgactcttatcacacttctggcggtgccctgc
attttaggtgtcaatctaactcacatggatctgcaggaatttctagagcagcttggtgat
actgatggagcatcaacaattccaccatctgtcattcgagtgcttaattttaaagcttgc
agaggtgcaattatgtttggggattccttgctgccttcagaatgttccctcattgttgaa
gagctaaagcagacctctctctgtttccaatgtgctcatggacgaccaaccactgcccct
cttgtcaacatggaggcatttcagaagcagataactaagcttggggcattagagggcgac
tcaaacaagccatggcatggtttgtgtagacaggaagttagtcttgaacgttctgcccag
cgattaacagaagctagaggcttttaa
DBGET
integrated database retrieval system
