Tripterygium wilfordii (thunder duke vine): 120014822
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Entry
120014822 CDS
T07256
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120014822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120014822
03009 Ribosome biogenesis [BR:
twl03009
]
120014822
04131 Membrane trafficking [BR:
twl04131
]
120014822
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twl04147
]
120014822
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120014822
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120014822
Membrane trafficking [BR:
twl04131
]
SNARE
SNARE associated proteins
Others
120014822
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120014822
Exosome [BR:
twl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120014822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
TIP49
AAA_33
AAA_14
RNA_helicase
AAA_22
Parvo_NS1
AAA_17
NPHP3_N
AAA_28
nSTAND3
Mg_chelatase
Sigma54_activat
AAA_7
AAA_18
ABC_tran
ATPase_2
NB-ARC
AAA_lid_PRS2_C
IstB_IS21
TsaE
Vps4_C
DUF815
Viral_helicase1
AAA_24
AAA_19
SLFN-g3_helicase
Rad17
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
120014822
NCBI-ProteinID:
XP_038722823
LinkDB
All DBs
Position
14:complement(2444618..2447411)
Genome browser
AA seq
835 aa
AA seq
DB search
MAEHLRKAKTLLCYSVIMSEHGKVSTFSNKKRNRGNNDDNNMSNGKKRSPNRLVVEESLE
DDNSMVSVHPTTMETLQMFIGDTVLIKGKKKRDTLCNVNADESCEDFKVRMNRVVRSNLR
VRLGDVVSVHICPNIKYGKRVHILPLEDTIEGITGNLFDAYLKPYFLDTYRPVRKGDLFL
VRGAMRAVEFKVMHTDPDEYCVVSTDTEIFCEGEPVKREDEESLDGIGYDDIGGVRKQLA
QIRELVELPLRHPQLFKAIGIKPPKGILLYGPPGTGKTLIARAIANETGAFFICINGPEI
MSKMAGESEGNLRKAFEEAEKNAPAIIFMDEIDSIAPKRDKTGGEIERRIVSQLLTLMDG
IKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRVHSKKMKLSDDV
NLERVAKDTHGYVGADLAALCTEAGLQCIREKMDVIDLDDDTIDAEILNSMVVTNEDFKA
SLGNSNPSALRETIVEVPNTSWEDIGGLEQVKKEVQETVSYPVEHPEKFEKFGMSPSRGV
LFYGPPGCGKTLMAKAIANECQANFISIKGPELLTMWFGESESNVRDVFDKARQSSPCVL
FFDELDSIAIQRGSSVGDAGGAADRVLNQLLTEMDGLSAKKTVFVIGATNRPDILDPALL
RPGRLDQLIYIPLPDERSRVQIFKSCLRKSPVSKNVDLSVIAKLTEGFSGADITEICQRA
CKYAIREDIEKDLEKKRSKSECSKSMEEDINVVEDDVAEIMACHFEEAMKYARRSVSDLD
IIKYEAFAQTLQQSRDFRDDSKFSNAETVPKGLNYFTSSAAGDEDEDEDEDQLYD
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcatctacgaaaagcaaaaactctgctatgctactctgttattatgagtgag
cacggaaaagtttctactttttcaaacaagaagagaaatcggggcaacaacgacgacaac
aacatgagcaacggaaagaagagatcccccaacagactcgttgtggaggaatccttagaa
gatgacaattctatggtttctgtgcaccccacaaccatggagaccctccagatgttcatc
ggcgacacggttctgatcaaaggtaagaagaagagagataccctctgcaatgttaatgcc
gacgaatcctgcgaggatttcaaggtaaggatgaatagggttgtgaggtcgaatttgagg
gtgaggcttggggatgtggtttcagttcatatttgccctaatattaagtatgggaagagg
gttcatattctgccattggaggatacaattgaaggaattactgggaatttgtttgatgct
tatttaaagccttattttcttgatacatatcgtccggtgaggaagggtgatttgtttctt
gtgagaggggcaatgcgtgccgtggagtttaaggttatgcacactgatcctgatgagtac
tgtgtggttagtactgatactgagatattttgtgaaggggagcctgtgaagagggaagat
gaggagagtttggatggtattggttatgatgatattggtggtgttaggaagcaattggct
cagattagagagttggtggagttgcctttaaggcatccacagctttttaaggctattgga
attaagccaccaaaagggattcttctttatggtcctcctggtactgggaagactttgatt
gcaagggctattgctaatgaaactggggctttctttatttgtatcaatggtcctgagatt
atgtctaagatggctggtgagagcgaggggaatctcaggaaggcttttgaagaagccgag
aagaatgctccggcgattatatttatggacgagattgactcgattgctcctaagcgcgac
aagactggtggggagatagaaaggaggattgtttcgcagctcttgacgctcatggatggt
atcaaatctcgtgctcatgtgattgttattgctgctacgaataggccaaatagtattgat
cctgcattgaggaggtttgggaggttcgatagggaaattgatattggtgttccagatgaa
gttgggaggcttgaggttcttcgagtgcattccaagaagatgaagctctcagatgatgtt
aacttggagagagtagcaaaagatacacatgggtatgttggtgctgatcttgctgctctc
tgcactgaagctggattacaatgcataagggagaagatggatgtgatcgatctggacgat
gacaccattgatgctgaaattctcaattccatggttgtcaccaatgaggacttcaaggct
agtcttggaaacagcaatccttcagctctacgagaaacaattgtggaagtacccaacaca
agctgggaagacattggtgggcttgagcaagttaagaaggaggtccaggaaacagtatcg
tatccggtggagcacccagagaaatttgagaagtttggaatgtcaccttctcggggagtg
ctgttctacggtcctcccggttgtggcaaaactcttatggccaaggctattgcaaacgaa
tgtcaagcaaacttcattagtatcaagggtcctgaactgctcactatgtggtttggagag
agtgaatcgaatgtgagagacgtttttgacaaggcacgccaatcttcaccttgtgttcta
ttctttgatgagcttgactccattgccattcagaggggaagtagtgttggagatgctggt
ggtgctgctgatagagtcttgaatcaacttttaactgaaatggacggtttgtcagcaaag
aaaactgtctttgtgattggtgctacaaacaggcctgacattctagaccccgcgcttcta
cgtccaggtcgtcttgatcaactcatatacattcctctgccagacgagaggtcacgcgtg
cagattttcaaatcatgccttagaaaatctcctgtttcgaagaatgttgatctatcagtt
attgccaagctgactgaaggctttagtggtgctgacataacggaaatctgccaacgagca
tgtaaatatgccatccgtgaggatattgagaaggacctggagaagaagaggagtaagagt
gagtgttccaaatcaatggaggaagatatcaatgttgtggaggatgacgtggcagagatt
atggcatgccactttgaagaagccatgaaatatgccaggaggagtgtcagtgatcttgat
atcattaaatacgaggcctttgctcaaactttacagcaatccagagattttagggatgat
tccaaattctccaacgcggaaacagtgcccaaaggtttgaactactttacatcttctgct
gctggtgatgaagatgaagatgaagatgaagaccagctatatgactag
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