Tripterygium wilfordii (thunder duke vine): 120014970
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Entry
120014970 CDS
T07256
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120014970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120014970
Membrane trafficking [BR:
twl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120014970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
VWA_2
VWA
Vps36-NZF-N
Zn_ribbon_10
Motif
Other DBs
NCBI-GeneID:
120014970
NCBI-ProteinID:
XP_038723053
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Position
14:complement(11234576..11239688)
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AA seq
789 aa
AA seq
DB search
MDFVELEAIEGLRWTWHSWPTTKTETASLIIPLAIMCTPLMQSESSELPLLSYEPLVCAK
CAAVLNPYARVDYQSRTWCCPFCFNRNHFPRSYDGITDTNLPAELFPTYSSVEYEIVRNS
TSNVYGTTPSGFGMYSSSSGSLSSMGSVGSLAQVGGGGGVVRRSGPAFVFVVDACMAEEE
LSAVKNELLRLVEQLPENTLVGLVTFDSMVKVHDLGYGECSRVVVLHGGRELSAEQTQQF
LGISRIKQRHVGKIPVIQKHGFLLTVSECEFNLTTAIEEISNSAEVMPGHRPQRCTGAAI
SAALGLLEGCLINNTGSRIMVFTSGPATLGPGTIVDSDLSKAIRTHRDIVNGHLPSYRKL
CSFYKRFSQRLVDIAAVLDLFACSLDQVGAAELKAPVERSGGFMMLGESFESDQFIKCFR
HIFNRDKEGHLKMYFDATLEIVTTEDVKICGALGPCVSLRRKNSLVSDNEIGEGGTYMWK
LGTLTNKTCIAFFFQVSDDRKPQPGSAFFIQFITKYQHGNLEIRKRVTTAARRWVGSKSS
EISTGFDQEVAAVVMARLAINRAESCYARDVIRWLDDALVRFTSKFGDYIQEDPSSFRLS
SNFSLYPQFMFYLRRSQFIDVFNTTPDETAFFRLMLNREGVVGSLIMIQPTLFQYSFDGP
PIPVLLDVRSISPDTILLFDSYFHVVIHCGSKIAQWRKLGYHKDPNHENLKKLLEAPELD
AEQLVAERIPAPKLIKCDQHSSQARFLLAKINPSVTQNSTYTEGLDVIFTDDLSLEVFID
HLQTLAVQG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtcgaattggaagcgatcgagggcctccggtggacgtggcactcatggccg
acgaccaaaacagagaccgcgtccctcataatcccactcgccatcatgtgcacgccactg
atgcaatctgagtcatcggagctcccgctactctcctacgaacccctcgtatgtgccaaa
tgcgctgccgttttgaatccttatgctcgagttgactaccagtcccgtacctggtgctgt
ccattttgctttaatcggaaccacttccccagatcctacgacggcataactgacactaac
cttcccgctgagctcttccccacttacagctcagtggagtacgagattgttcgcaattcc
acctccaatgtctatggtactactcctagtgggttcggtatgtactcttcctcgtccggg
tctctgtcgtcgatgggatcggtgggttctttggcgcaggtcggcggtggcggtggggtg
gtcaggaggtcaggtccagcttttgtgttcgtggtggatgcgtgtatggcggaggaggag
ttgagtgcggtcaagaatgagttgttgcggctcgtggagcagttgccggagaacactttg
gtagggttggtaacgtttgattcgatggttaaggtgcatgatcttgggtatggggagtgc
tcaagggttgtggttcttcatggcggtcgtgagctttcagctgagcagacacagcagttt
cttggcattagtcgtattaagcaacggcatgttgggaagataccagttatccaaaagcac
ggttttttgctaactgtatctgaatgtgaattcaacttaactactgcaattgaagaaatt
tctaattcagcagaagtcatgcccgggcatcgccctcaaaggtgcacaggagcggccata
tcagctgcacttggacttttggaaggatgcctaattaataatacaggctcccgaatcatg
gtcttcacttctgggcctgcaactttgggccctggaactattgtagattcagatcttagt
aaagctatcagaactcacagagacattgttaatggccatttgccttcctatagaaagttg
tgctctttctacaaacgtttttcgcagagattagttgatattgctgctgttcttgattta
tttgcttgttctcttgatcaagttggagcagcagaactaaaagctcctgttgaacgatca
ggtggattcatgatgctaggggagtcgttcgagtctgatcaattcataaaatgttttcgg
cacattttcaatcgcgacaaagagggacatttgaagatgtattttgacgcaacccttgag
atagtgacaactgaagatgtaaaaatttgtggagcccttgggccttgtgtttctcttcgg
agaaagaatagtttagtcagtgacaatgaaattggggagggtggcacttatatgtggaag
ttgggtactctgactaataaaacatgcattgctttctttttccaagtgagtgacgatcga
aaaccccagcctggatcagcattttttatacagtttataacaaaataccagcatgggaac
ttggaaattcgcaaaagggtgacaactgctgcaagacgatgggttgggagcaagtcatca
gaaatttctactggatttgatcaagaagtagcagctgtagtcatggctagacttgccatc
aaccgtgcagagagttgttatgcccgagatgttatcagatggcttgatgatgcgcttgtt
cgttttacatctaagttcggtgattacattcaggaagacccatcttccttccgtttgtcc
tctaacttctccctttatccccaattcatgttctatttaagaaggtcccaatttattgat
gtctttaacaccactcctgatgagactgctttcttcaggctgatgctaaaccgtgagggt
gttgtgggttctcttataatgatccaacctacactttttcaatattcatttgatggccct
cctattccagtgctccttgatgttcgctctatctctcctgatactatattgctttttgat
tcttacttccatgtggttattcactgcgggtccaagattgctcagtggaggaagcttggc
tatcacaaggacccaaaccatgaaaacctgaaaaagctgttggaagccccggagcttgat
gcagagcaattagtggctgaaagaattccagcacccaagctgataaaatgtgatcagcac
agtagtcaggctaggtttcttctagccaagataaatccatctgttactcagaattcaaca
tatacagaaggtttagatgttatatttactgatgatttgagcttggaagttttcatagat
catttgcagaccctggcagtacagggctaa
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