Tripterygium wilfordii (thunder duke vine): 120015137
Help
Entry
120015137 CDS
T07256
Name
(RefSeq) pre-mRNA-processing factor 19 homolog 1
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120015137
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120015137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120015137
04121 Ubiquitin system [BR:
twl04121
]
120015137
03400 DNA repair and recombination proteins [BR:
twl03400
]
120015137
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120015137
Spliceosome [BR:
twl03041
]
Complex B
Other components
Prp19 complex
120015137
Complex C
Prp19-CDC5 complex
120015137
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
U-box type E3
120015137
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
120015137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_EIPR1
U-box
Beta-prop_Vps41
WD40_like
Beta-prop_SPT8
Tachylectin
PAS_11
KNTC1_N
zf-Nse
V_ATPase_I_N
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
120015137
NCBI-ProteinID:
XP_038723291
LinkDB
All DBs
Position
14:complement(10460880..10470259)
Genome browser
AA seq
531 aa
AA seq
DB search
MNCSISGEVPEEPVVVRTSGLLFEKRLIERHISDYGKCPITGEPLTMDDIVTVKTGKIVK
PRMVQTASIPGMIGMFQNEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAQAERQIPMSTSTAVSVNASTVVVSNGKRAAEDEELGPGAKKACPGISASI
IADLTECNAALSQQRKKRQISATLASVDALERYTQLSSHPLHKTSKPGIISLDIHHARDI
IATGGADANAVVFDRPSGEILSTLSGHSKKVTSVKFVGEGDLVLTGSADKTVRIWQGAED
GNYDCRHVLKDHTAEVQAVTVHATNNYFVTASLDSTWSFYDISSALCLAQVTDTSGSEGF
TSAAFHPDGLILGTGTAGALVKIWDVKSQQNVANFDDHVKSGQTGPITSMSFSENGYFLA
TAAHDSVKVFDLRKLKNIRTFRFDDSDTPTNYAEFDHSGSYLAVAGADIRIYQVASVKAE
WNCIKTFPDLSGTGKTTCVKFGQDAKYVAVGSMDRNLRLFGLPGDDGSLES
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaactgctcaatatccggcgaggtgccggaagagcccgtcgttgtaaggacgtctggg
ctgctcttcgagaagcgcttaattgagaggcacatatcggattatggaaaatgcccaatc
accggtgaaccacttactatggatgatatcgtcacagtaaaaacaggcaagattgtaaag
ccaaggatggtgcagactgctagcatacctgggatgattggaatgttccaaaacgaatgg
gatagtttgatgttatcaaactttgctttggagcaacaactacatacagcaaggcaggag
ctgagccatgcactataccagcatgatgctgcttgtcgtgtgattgcaagactaaagaag
gagagggatgaagcaaggtcattacttgcacaggctgagaggcagatacctatgtcaact
tcaacagctgtgtcagtcaatgcctctactgtggtggttagcaatgggaaaagagctgct
gaagatgaagagttgggccctggtgcaaagaaagcatgccctggaatttctgctagcatc
atagctgacttaacggaatgtaatgcagctctctcacaacagcggaagaagcgccagatc
tccgcaacattggcttctgttgatgcactggagagatatacccagctttctagtcatcca
cttcacaaaactagcaaaccaggcatcatatcactcgatatccatcatgccagggacata
attgcaaccggaggggctgatgcaaatgctgtagtttttgatcgaccttcaggagagatc
ttatccacactcagtggtcactcgaagaaggttactagcgtaaagtttgtgggtgagggt
gatttagttttgaccggctcagcagacaagacggttcgtatatggcaaggggctgaagat
gggaattacgactgtaggcacgtcttgaaagatcatacagcagaagtgcaagctgtcact
gtccatgccacaaacaactactttgtgactgcctctcttgacagtacatggtccttctat
gatatttcctctgcactctgcttggcgcaggttacggatacttcaggatctgagggcttc
acatctgctgcatttcatcctgatggtcttattctgggaacgggcaccgctggggccctt
gttaaaatttgggatgtaaaaagtcagcaaaatgttgcaaattttgatgatcacgttaaa
tcagggcaaactgggccaattacttctatgtctttctcggaaaatggatacttccttgcg
actgcagctcatgatagtgttaaagtatttgacctacgtaaattgaagaacatccgaaca
ttcagatttgatgattcagatacaccaacaaactatgcggaatttgatcatagcggaagt
tacctcgcagttgcaggcgcagatattagaatctaccaagttgccagtgttaaagcggaa
tggaattgtattaaaactttcccagacttgtctggcacaggtaaaaccacttgtgtaaaa
tttggtcaagatgcaaaatacgtggcagttggttcgatggatcgtaacctccgcttattt
ggcctgcctggggatgatggttcgttagaatcatga
DBGET
integrated database retrieval system
