Tripterygium wilfordii (thunder duke vine): 120015187
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Entry
120015187 CDS
T07256
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04142
Lysosome
twl04144
Endocytosis
twl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120015187
04142 Lysosome
120015187
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120015187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120015187
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twl04147
]
120015187
Membrane trafficking [BR:
twl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120015187
Exosome [BR:
twl04147
]
Exosomal proteins
Proteins found in most exosomes
120015187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
120015187
NCBI-ProteinID:
XP_038723411
LinkDB
All DBs
Position
1:7078745..7097719
Genome browser
AA seq
1706 aa
AA seq
DB search
MAAANAPIAMKEVLTLPSVGISQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNQPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQIVFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPAKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGS
PERQQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKIPGNENPSVLISFATKTFNAGQITS
KLHVIELGAQPAGKPSFTKKQADLFFPPDFADDFPVAMQVSHKYSLIYVITKLGLLFVYD
LETATAVYRNRISPDPIFLTAEASQAGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLE
LAVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPV
QAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDL
VKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADP
QGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHA
IEPQALVEFFGTLSREWALECMKDLLLVNLRGNLQLIVQVAKEYSEQLGADACIKIFEQF
KSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLME
AKLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPANAPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVEQCEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQAR
YVVERMDGDLWAKVLDPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADPPRVMDYINRLDNFDGPAVGEVAVEAQLY
EEAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAI
ESFIRAEDTTQFLEVIRAAEDANVYHDLVRYLLMVRQKVKEPKVDSELIFAYAKIDRLSD
IEEFILMPNVANLQNVGDRLYDDALYEAAKIIFAFISNWAKLACTLVKLKQFQGAVDAAR
KANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLY
IQYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNV
LALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYIEEEDYERLRESIE
FHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWRQSIGLSKKDNLYKDAMETASQSG
DRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWFNNMIDFAFPYLLQFIRE
YTGKVDELVKDKIEALKEVKAKEEEEKDVIAQQNMYAQLLPLALPAPPMPGMGGPGMGGG
FAPPPPMGGMGMPPMPPFGMPPMGNY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgaacgccccgatcgccatgaaagaggtcttaactctgccaagtgttggg
attagtcagcaattcatcacgtttacaaatgttaccatggaatcagataagtatatttgt
gtacgagaaacagcccctcagaatagcgttgtcatcattgacatgaatcagccaatgcag
cctttgaggaggcctattacagcagattcagcgctgatgaatccaaattcaagaatcctt
gctctgaaagctcaacttccgggaactacccaagatcacttacagatatttaacattgaa
atgaaggcaaaaatgaaatcacatcagatgccagagcagattgtcttttggaagtggatc
acaccaaagatgttggggctcgtcacacagacatctgtgtatcattggtctattgaaggg
gattctgaacctgcaaagatgtttgagagaacagcgaatttggcgaacaatcagataata
aactatcgatgtgatcctaccgagaagtggttggttttgattggaattgcacctggttca
cctgagcgccaacaattggttaaaggaaacatgcaacttttctctgttgatcagcagcgt
agtcaagctctggaggcacatgctgcagcatttgcacaatttaagattccggggaatgag
aatccttctgttctcatatcgttcgccactaagacctttaatgctggtcagattacatca
aagttgcatgtgatcgaacttggtgcccagcctgcaggtaagccgtcattcacaaagaaa
caggccgatcttttcttccctcctgattttgctgatgactttccagtcgcaatgcaggta
tcccataagtacagtttgatttacgtgatcaccaagcttggactactatttgtttatgat
ttggagacagctacagctgtatacagaaatagaattagtccagacccaatattcttgact
gctgaagcttcgcaagcagggggtttctatgcaatcaataggcgaggccaggttttactg
gctactgttaatgaagcaacaattgtaccctttgtcagtggtcaattgaacaatctggaa
cttgcggtcaatctcgcaaaaagagggaaccttcctggagctgaaaatctggttgtccag
cgtttccaagaactttttgcgcaaacaaagtataaagaagctgctgaacttgctgcagag
tctccacagggaatccttcgtacacctgacacagttgccaagtttcagagcgttcctgtg
caagcggggcaaacaccaccgctgctgcagtacttcggtactcttctaacaagaggaaaa
cttaatgcattcgagtcattggaactatcacgccttgttgtgaatcagaacaaaaaaaat
cttttggagaattggttggcggaggacaagctggaatgtagcgaggaacttggagacctt
gtcaagactgtggataatgatcttgcactgaaaatatatattaaagctagagcgacacca
aaagttgttgctgcttttgctgagcggagggagtttgacaaaattttgatttactcaaag
caagttgggtacacacctgattatttgtttctcctgcaaactattctccgtgcagacccg
cagggagctgttaactttgcattgatgatgtcacaaatggagggaggctgtccagttgat
tacaacaccattacagatctttttctgcagaggaatttgatccgtgaagcaactgcattt
ctattagatgttttgaagcctaatctacccgaacacggttttcttcaaacaaaggtcttg
gaaattaatcttgtaacttttcccaatgtagctgatgctattttagctaatggaatgttc
agccactatgatcgtcctcgtattgctcaactatgtgaaaaagctggtctttatgtgcga
gctttgcaacattactcggagttgcctgatattaaacgtgtcattgtgaatactcatgca
attgagcctcaggcacttgttgaatttttcgggactctttcacgggaatgggctttggag
tgcatgaaggaccttcttcttgtcaatctgagaggcaatctccagctgattgtgcaggtt
gcaaaagaatattctgagcagttgggtgctgatgcatgcattaagatttttgagcaattc
aagtcatatgaggggttgtactttttccttgggtcatatttgagttccagtgaggatcct
gatatacattttaagtacattgaggctgctgccaagactgggcaaataaaggaggttgag
cgggttaccagagaatcaaatttttatgatcctgaaaagacaaagaactttctgatggaa
gccaagcttccagatgcacgaccattgattaatgtttgtgatcgttttggttttgttcct
gatctcactcactacttatattccaacaacatgcttcgctacattgaaggttatgttcag
aaggtgaaccctgcaaatgctcctttagttgtggggcagctgctagatgatgaatgccca
gaagattttatcaaaggactgatactctctgtccgttctttgcttcctgttgagcccctt
gtggaacagtgtgaaaagagaaatcgacttcgattactcactcagttcttggagcatctt
gtgagtgagggaagccaagatgtgcatgtccacaatgccctgggtaaaattattattgat
agcaataacaaccccgagcacttcctcacaaccaatccttactatgactcaagggttgtg
ggcaagtattgtgagaaacgtgatcccactttggctgttgtggcttaccgtagaggacaa
tgtgatgatgaactcattaacgttacaaacaagaactctttgtttaagttgcaagccaga
tatgtcgttgaaaggatggatggtgatctctgggcgaaggtccttgatccagagaatgaa
tatagaagacaactcattgatcaagttgtatctactgctttgccagaaagcaagagccca
gaacaagtttctgcagctgttaaagctttcatgactgctgacttgccccatgaactaatt
gaactccttgaaaagattgtgctccaaaactctgcattcagtggcaattttaatctacaa
aaccttctcatcttgacagctattaaggccgacccacctagggttatggattatattaac
agattagataactttgatggccctgcggttggggaggtagctgtagaagcccaactttac
gaagaagcgtttgcaatttttaagaagtttaatttgaatgttcaggctgttaatgtctta
ttggataacatccgaagcattgaccgggctgtggagtttgcattccgtgttgaagaagat
gcagtttggagccaggtcgcgaaggctcagcttagagaagggctagtgagtgatgcaatt
gagtcatttattcgtgcggaagacactactcaattcctggaggttattcgtgctgcagag
gatgcaaatgtctaccatgacttggtgaggtaccttctaatggttaggcagaaagtgaag
gagcccaaggtagacagcgagctcatctttgcctatgccaagattgataggttgagtgat
attgaagaatttattctgatgccaaatgtggccaatcttcaaaatgttggtgatcgcttg
tatgatgatgccctttacgaggctgcaaagattatatttgcatttatttcaaactgggcc
aagttggcttgcacacttgtgaagctgaaacagtttcagggtgctgttgatgcagcccgc
aaagcaaatagtgcaaagacatggaaggaagtttgctttgcttgtgttgatgcagaggag
ttccgtttggcacagatttgtggactcaacattattgtacaggttgatgatttggaggaa
gtcagtgaatattaccagaatagaggatgcttcaatgagttgatctctctcatggagagt
ggtctagggttagaacgtgcacacatgggcattttcactgaattgggagttctatatgct
agatatcgtcctgagaagcttatggagcacatcaaattgttctcaacacgtctcaatatc
cccaagcttatacgagcttgcgatgaacaacagcattggaaagagctaacttatttgtac
atacaatatgatgaatttgacaatgccgcgacaactataatgaaccattcccctgaagca
tgggatcacatgcagttcaaagatgtcgtggtcaaagttgctaatgtggagctatactat
aaggcggtgcatttttacctgcaagaacatcccgatctcataaatgatgttcttaatgtg
cttgcgcttcgggttgatcatacacgtgttgttgacatcatgcggaaggctggtcacctg
cgtcttgtgaagccatacatgattgcagttcagagcaacaatgtgtctgctgtaaatgag
gctttgaatgagatatacatagaggaggaagactatgagagactgcgtgaatcaattgag
tttcatgacaactttgaccagattggccttgcacagaagattgagaaacacgagcttctt
gaaatgagacgcgttgctgcttatatttacaaaaaagcaggccggtggaggcagtccatt
ggtttgtcaaagaaggacaacctttacaaggatgccatggagacagcttcacaatctggt
gatcgtgaacttgcggaggaattgcttgtttatttcattgagcagggcaagaaggaatgc
ttcgcgtcatgcctcttcgtttgttatgatttaatacgaccagacgttgctctagagctt
gcctggtttaacaatatgattgactttgcattcccatatctgttgcagtttatccgtgaa
tatacaggcaaagttgatgaacttgtgaaggacaaaattgaggctctcaaagaagttaag
gctaaagaggaggaagagaaggatgtgattgcacagcagaacatgtatgcacagttactg
cctcttgctttgcctgcgccaccaatgccaggcatgggaggacctggaatgggtggtggt
tttgctccgcctccacccatgggaggtatggggatgcctccaatgccaccttttggcatg
ccacctatgggaaactactga
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