Tripterygium wilfordii (thunder duke vine): 120015268
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Entry
120015268 CDS
T07256
Name
(RefSeq) polyadenylate-binding protein 4
KO
K13126
polyadenylate-binding protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120015268
09123 Folding, sorting and degradation
03018 RNA degradation
120015268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120015268
03041 Spliceosome [BR:
twl03041
]
120015268
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120015268
mRNA cycle factors
Stress granule specific factors
120015268
Spliceosome [BR:
twl03041
]
Complex C
Other components
Complex C specific factors
120015268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_7
RRM_Nup35
RBD_DGKtheta
N36
Motif
Other DBs
NCBI-GeneID:
120015268
NCBI-ProteinID:
XP_038723544
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All DBs
Position
14:complement(1692462..1698518)
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AA seq
649 aa
AA seq
DB search
MAQAQVQPQPQPPVSPQNGVVSPGGGQFSSTSLYLGDLDFNVYESQLYDLFSQVGPVVSV
RVCRDVSSRRSLGYGYVNYSNSHDAARALDVLNFTSVNGKMIRIMYSSRDPTLRKSGAGN
IFIKNLDRAIDNKALHETFSLFGNILSCKIATDPSGQSKGYGFVQFDNEESARNAIDKLN
GMLLNDKQVYVGPFLRKQERETAVDKKKFNNVYVKNLSDSTTDEDLKKIFGEYGTITSAV
VMRDGDGKSRRFGFVNFEGTDDAARSVEALNGKVFDDKEWYVGKAQKKTEREAELKGKFE
LTVKETVDKYEGLNLYVKNLDDNITDDRLKELFSEFGTITSCKVMRDPNGISRGSGFVAF
STAEEASRALVEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVLVPAAAPRMPIY
PPGAPGLGQQLFYGQGPPAIVPPQPGYGYQQQFVPGMRPNFFVPMVQPGQQTQHPGGRRS
GAGQMQQPQHSLPIMQSPHMLPRGRGYRYPSGRNMPDGPFGGVPGAMLPVPYDIGGTPFR
DATFSLPLQTGALASAIANATPEQQRTLLGENLYPLVDQLEHDNAAKVTGMILEMDQTEV
LHLLESPEALKAKVAEAMDVLRNVAQQQQQGGSPTDRMALLSLKDNLVS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggctcaggtccagccacagccacagccacctgtttctcctcaaaacggggtg
gtcagccctggagggggtcagttctcgtcgacttccctttatcttggggatcttgacttt
aatgtttatgagtcgcagctgtatgatttgtttagccaggtgggtccggtcgtatcggtc
cgggtctgcagggacgtgagcagccgccgctcccttggctatggttatgtcaactatagc
aactcccacgatgcggcacgtgcattagatgtattgaacttcacttctgtcaacggcaaa
atgattagaataatgtattcttctcgtgaccctacccttcgcaaaagtggtgcaggaaat
attttcatcaagaatttggacagagcaattgacaacaaagctctgcatgaaactttctct
ttatttgggaatatattatcttgtaagatagcaactgatccttcggggcaatctaaagga
tatggttttgtacaattcgacaatgaagaatctgccaggaatgcaattgataagctaaat
ggtatgctattgaatgacaaacaagtttatgttggacctttccttcgtaagcaggaaaga
gaaactgctgtagataagaaaaaattcaacaatgtctatgtcaagaatctttcagattca
acaactgatgaagatctaaagaaaatttttggtgaatatgggactattactagtgctgta
gttatgagagatggagatggaaagtctagacgttttggatttgttaactttgaaggcact
gatgatgcagctcgatctgttgaagctctcaatggaaaggtttttgatgataaagagtgg
tatgttggaaaagcacagaaaaaaactgaaagagaagctgagttgaaaggaaaattcgag
ctcacagtgaaggagacagtagacaaatatgaaggactgaatttatatgttaaaaaccta
gatgacaacatcactgatgataggcttaaggagttattctctgaatttggaaccattact
tcatgcaaggttatgcgggaccctaatggcataagtagaggatcaggatttgttgccttc
tcaactgctgaagaagcatctcgagctcttgtggagatgaatggtaaaatggtagttagc
aagccgctttatgttgcacttgcgcaacggaaagaagaaagaagggcaaggttgcaggca
caattttcacagatgcgtcctgtactggtgccagcagctgccccccgaatgccaatatat
cccccaggagctccaggtctaggacagcagctattctatggtcaaggaccacctgctatc
gttcctcctcaacctggatatgggtatcagcagcaatttgttcctggaatgagaccaaat
ttttttgtgccaatggtccagccaggccagcagacccagcatcccggaggtagacggtct
ggggcagggcaaatgcaacaacctcagcattcactccctataatgcagtcgccacatatg
cttcctagggggcgtggctatcgttatccttctggtcgcaacatgcctgatggtcccttt
ggcggtgttcctggggcaatgctccctgttccatatgacattggtggaacgcccttcagg
gatgctacattttctctgccattgcaaactggtgctttggcttcggctattgctaatgca
acacctgagcaacagagaacgttgctgggtgaaaatttgtacccacttgtggaccagttg
gagcatgataatgcagcaaaggtgacaggcatgattctagagatggatcagaccgaggtt
ttgcacttgctagagtctcctgaagccttgaaagccaaagttgctgaggctatggatgtt
ctacggaatgttgcccaacaacagcagcagggtggtagccccactgatcggatggccttg
ctgtctttgaaggacaaccttgtttcttga
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