KEGG   Tripterygium wilfordii (thunder duke vine): 120015334
Entry
120015334         CDS       T07256                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120015334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:twl03019]
    120015334
   03036 Chromosome and associated proteins [BR:twl03036]
    120015334
Messenger RNA biogenesis [BR:twl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     120015334
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     120015334
    COMPASS/SET1 complex (yeast)
     120015334
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_WDR75_1st KNTC1_N Beta-prop_DCAF4 Beta-prop_Nup120_160 eIF2A Beta-prop_WDR35_TULP_N Cytochrom_D1 VPS11_N Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 120015334
NCBI-ProteinID: XP_038723641
LinkDB
Position
14:complement(455681..458937)
AA seq 341 aa
MGGTQPEREEKVSLELTEEIIQSMEVGMAFRDYNGRISSMDFHKTSSYLVTASDDESIRL
YDVSTATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRNDCFISGSLDRTVLLWDQRAERCQGLLRVQGRPATAYDDQGLVFTIAF
GGFVRMFDARKYEKGPFEIFSVGGDASDANVIKFSNDGRLMLLTTMDGHIHVLDSFRGTI
LSTYNVKPVSSNSTLEASFSPEGMFVVSGSGDGSVHAWSVRSGKEVAHWMSFETVTSWMS
TEVEPPVVRWAPGSLMFVKGSSELAFYIPDLSKLGAYAGRK
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggtgggacacaaccggagagggaagagaaggtctcgttggaactaactgaggagatt
attcaaagcatggaagttggcatggcgtttagagattataatggtagaattagttctatg
gatttccacaagacatctagttatctggtaactgctagtgacgatgaatccatccgcctc
tatgatgtttccactgctacatgtttgaagacaattaatagcaaaaaatatggagttgat
cttgtctgctttacatctcatcctacaacagtcatatactcttcaaaaaatggttgggat
gaatctctaaggcttctgtccttgcatgacaacaagtacttacggtatttcaaaggtcac
catgacagggttgtttctcttagcttgtgctctcgtaatgattgctttatttctggctca
ctggatcgaacagttttgctttgggaccaacgagctgagaggtgtcagggacttttacgt
gtacaaggaaggcctgccacagcatatgatgaccaaggactagtttttacaattgcattc
ggaggattcgttagaatgtttgatgctcggaagtatgaaaagggcccttttgaaatattt
tctgttgggggagatgcatctgatgcaaatgtcataaaattcagcaatgatgggagactt
atgcttttaacaacaatggatggacacattcatgttcttgactcattccgtggcacaata
ctatccacatataatgtgaagccagtttcaagcaattcaacattagaggcatctttcagc
cctgaggggatgtttgttgtatctggttcaggtgatggtagtgttcatgcttggagtgta
cgaagtgggaaagaggttgcacattggatgagctttgaaactgttacaagttggatgagt
actgaagttgagcccccagtggtaaggtgggctcctggaagtctcatgtttgtgaaagga
tcttctgagctggccttctatattccagacttatcgaaattgggagcttacgccggaagg
aagtag

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