Tripterygium wilfordii (thunder duke vine): 120016105
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Entry
120016105 CDS
T07256
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120016105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
twl03011
]
120016105
Ribosome [BR:
twl03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
120016105
Bacteria
120016105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
120016105
NCBI-ProteinID:
XP_038724639
LinkDB
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Position
15:complement(5634372..5638728)
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AA seq
529 aa
AA seq
DB search
MQTLLQPCKFFSLLNSSEQPCFDFVVVHNSIRIRAPQSNPNSPLQKIQTFGAFSRNTLVV
SNNFPVWGSTQIVSCSQKHVVDSVWNSQLPGKADEPRIDENEELELLNKPSPLKNGSSSV
VDNESKKLDEEEALAPFMKFFKPRDSSSPEAEEDNGELGVMEQKSEVKTDDEEAKKINVE
YYDPKKGDLVVGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYEKEMEYLLCDLSKNGKE
FMVGGKTGIVRNDDALNGEPGLGRPVVETGTILFAEVLGRTLSGRPLLSSRWLFRRIAWH
RVRQIRQLNEPIEVKIMEWNTGGLLTRIEGLRAFLPKAELVNRVNNFTELKQNIGRRIFV
RITRINEDTNDLILSEREAWEKLHLKEGTLLEGTVKKIFPYGAQIRIGETNRSGLLHVSN
ITRAQVNSVDELLKVDEKLKVLVVNSMFPDKISLSIAHLESEPGLFISNKEKVFAEAEEM
AKRYRQKLPNVLPTHTLETPSTSGLPFDNEASMYANWKWFRFERENEVQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacccttcttcaaccatgtaagttcttctctctcctcaactcttctgaacaaccg
tgttttgattttgttgttgtccacaactcgattcgtattagagctcctcaaagcaacccc
aattcaccacttcaaaaaatccaaactttcggcgcattttctcgcaataccctagttgtc
tcaaacaattttccggtttggggaagtacccaaattgtctcttgctctcaaaagcatgtt
gtagatagtgtttggaattcccaattgcccggaaaggctgatgaacctagaattgatgag
aatgaggagcttgaattgctgaacaagccgtctccattaaaaaatggttcatcttcagta
gttgataatgaatccaaaaaacttgatgaggaggaggcgctggcaccttttatgaagttc
ttcaagcctagagattcttcttcaccagaagccgaagaagacaatggtgaattaggtgtt
atggagcagaaaagtgaggtaaaaactgatgatgaggaagctaagaagattaatgttgag
tattatgacccaaaaaagggtgacttagtggtgggtgtggttgtgtctgggaatgagaat
aagcttgatgtgaatgttggggcagatttattgggtacaatgttgacaaaggaggttctt
cctttatatgaaaaagagatggaatacttgttatgtgacttaagcaagaatggtaaggag
tttatggttggagggaagacgggaattgtaaggaatgatgatgcactgaacggggaacca
ggccttgggaggcctgtagtggagactggaactattctgtttgcggaggtcctggggaga
acattgagtgggagaccgctgctatcctctagatggctcttccgaaggattgcttggcat
cgagtgaggcagataaggcaactcaatgaacccattgaggttaagattatggaatggaat
acggggggccttctcacgaggatagagggattgagagctttccttccaaaagctgagttg
gtcaatagggtgaacaactttactgaattgaaacaaaatattggccgtcgaatatttgtc
cggatcactcgaataaatgaggatactaatgacttaatactgagcgagagggaagcatgg
gaaaagttgcaccttaaggagggaactcttctggaaggaactgtcaagaaaattttccca
tatggagcccaaataaggataggtgaaactaatagaagtgggttgctgcacgtctccaac
atcactcgtgcccaggtcaattcagttgatgagctacttaaagtggatgagaagctgaag
gttctggttgtgaactcgatgtttcctgataaaatctctctcagtattgctcacctcgaa
agtgagcctggcctatttatatctaacaaagagaaagtatttgccgaggcagaagagatg
gcgaagagatacaggcagaagctacctaacgttctgccaactcatacgttagagacacct
tcgactagtggtctaccttttgacaacgaagcgagtatgtatgcaaattggaagtggttc
agatttgaaagagagaatgaagtgcaatga
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