KEGG   Tripterygium wilfordii (thunder duke vine): 120016274
Entry
120016274         CDS       T07256                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03030  DNA replication
twl03410  Base excision repair
twl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120016274
   03410 Base excision repair
    120016274
   03420 Nucleotide excision repair
    120016274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:twl03032]
    120016274
   03400 DNA repair and recombination proteins [BR:twl03400]
    120016274
Enzymes [BR:twl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     120016274
DNA replication proteins [BR:twl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    120016274
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      120016274
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE
Other DBs
NCBI-GeneID: 120016274
NCBI-ProteinID: XP_038724891
LinkDB
Position
15:complement(669227..674253)
AA seq 527 aa
MSGAVRKKVQRKFKMRGYSLKVDALDEVLSFVSRFEGAEDEAIDLLLDQLLHESLKSSII
DKEAMHRVISLLLEAEGAVEESESMVSSSSAIRVTDAFLVPKFRYDPIKKQYYEHTGSLP
IHGAASAKAALYRDRFLLLFQRVSRDPHFAKPAFDTEMSHYGSCEIASIQSLIGQTGRRW
VMGVISQLEDGHFYLEDLTAAMEINLSKAKITTGFFSENTIVVAEGEMLLEGIFQVTTCG
FPPLEEREKSMKLLQGHDLFGSGILTKEDTLRLAELEKRAVNDMFVILSDIWLDNDEVMA
KLETILDGFENVEVTPSLFVFMGNFCSHPCNLSFHDFSSLRLQFGKLGKVIGAHPRLKEH
SRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRIKFYTQEIVFFRQD
LLYRMRRSCLIPPSTEETNDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLHLYPTPH
TIVLGDKSEQKAFKYTGITCFNPGSFSNDSTFVAYRPCTQEVEFSAL
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgagtggcgcagtgaggaagaaggtgcagaggaagttcaagatgagaggctactctctc
aaagtggacgccctcgatgaggtcctctccttcgtcagtcgcttcgaaggcgccgaagat
gaggcaatcgacctcctcctcgaccagctcctccatgagtcacttaaatcttcgattatt
gataaggaggcaatgcatagggtaatcagtcttttgttagaagctgaaggtgctgttgag
gaaagtgaatccatggtatcaagtagctctgcaattcgcgtaactgatgcgtttttggtc
ccaaaattccgttacgatcccatcaagaagcaatactacgagcatacaggaagcctacct
atccatggcgctgcatctgcaaaagcagctttatacagggataggtttctgttgctgttc
cagagagtgtctcgcgatccacattttgctaaacctgcttttgatactgaaatgtcacat
tatggaagttgtgagatagcttcgattcaatctctaattgggcaaacagggagaagatgg
gtcatgggagttatatcccagttagaagatgggcacttctacttggaagatcttactgct
gccatggaaattaacttgtccaaagcaaagataactaccggattcttttcagaaaacaca
atagttgtggctgaaggtgagatgcttttggagggtatttttcaggtaactacgtgtgga
tttcctccgttagaggagagagaaaagtctatgaagttacttcaagggcatgaccttttc
ggtagtggtatattgacaaaagaggatactcttagacttgcagaattggaaaagagagcc
gttaatgatatgtttgttatactctctgacatttggctggacaatgatgaggtcatggca
aagctggaaactatacttgatggttttgagaatgtagaagtaactccatccttatttgtt
ttcatggggaacttttgctcccacccgtgtaacctttccttccatgatttctcaagtcta
agactgcagtttggcaagttagggaaagttatcggagcccatcctaggctaaaagagcat
agtcggtttctgtttataccaggtcctgatgatgcaggtccctccacagtcctacccagg
tgtgctttaccaaaatatttaactgaagagcttcagaagcatatcccaaatgcaatattt
tcaagtaatccttgcagaatcaaattctacacccaagaaatcgtatttttccgccaagat
ctgctgtataggatgcgtcgatcatgcctgatacctccatctaccgaagaaaccaatgat
ccttttgagcatcttgttgctacaataacccatcaaagtcatctctgcccgctccctctc
actgtacagccaataatttggaactatgatcattgtctccatctctatcctactccacac
acgatagttttaggagacaaaagtgagcagaaggctttcaaatacacaggaatcacttgt
tttaaccctggatccttctcaaatgacagcacttttgtagcttatcgtccttgcacacag
gaagttgagttttcagccctgtga

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