Tripterygium wilfordii (thunder duke vine): 120016344
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Entry
120016344 CDS
T07256
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120016344
Membrane trafficking [BR:
twl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120016344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
120016344
NCBI-ProteinID:
XP_038725007
LinkDB
All DBs
Position
15:complement(12537105..12557353)
Genome browser
AA seq
1915 aa
AA seq
DB search
MFVVGWTFWTRLLTPVFAGSLSAASKLGVAASCLLGLNTESIITSTTLFLFKISGRFACL
FQLEFGGRMDVGGSSGGNGGQRFRRIPRHSYSHVKLDPLIDENVEQWPHLNELIQCYQSD
WVKDENKYGHYESINPSSFENQIFEGPDTDIETEMRLTSARQTKAEEYTDDDNPSTSGRQ
FTEVESSLPLGLKHFGQSPLPAYEPAFDWENERSTIFGRRIPETPMAQYGSGLKISVKVL
SLSFQAGLVETFYGTICLYNKERREKLSEDFYFCILPTEMQDGNVSYEPRGVFSLDAPSA
SVCLLIQLERPTTEEGGVSSSVYSRKEPVHLTEREKQKLQVWSRIMPYGESFSWAIVPLF
DNSIGGTSGGSASPSSPLAPNMSGTSSNDGVFEPIAKVTSEGKLGYSSGNSVIVELSNLN
KVKESYTEDSLQDPKRKVHKPVKGILRLEIEKHQTDHTDLENISESGSVTNDFIDPGDRM
VDSTLKKSPSDGADVPQSSNSKWSNYDGKEISGNGSNARGNPDLSVDDFQAFDFRTTTRN
EPFMQLFHCLYVYPLTVSLSRKRNLFIRIELRKDDMDIRRQPLEALYPREPGTSLQKWAH
TQVAVGARVASYHDEIKLSLPVIWTPSHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLST
HAQLRSEISLPIIKELVPHYLQESGKERLDYLEDGKNVFRLRLRLCSSLYPINERIRDFF
LEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAF
RAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGGRQLPVYPGLSTVWGSLARSKAKG
YRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFYHSLPLGEDVPPMQLREGVFRCIMQLY
DCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLSVIEPRQVFELVSLYLDKFSGVCQSVL
HDCKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQELFLTWDHDDLSQRAKAARTLVV
LLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREALIVILQIMRNL
DDASLVKAWQQSIARTRLFFKLMEECLSLFEHKKTADILLLGSSSRSPVGEGPGSPKYSD
RLSPAINNYLSEASRQEVRPQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGA
SAQALRESLHPVLRQKLELWEENLSAAVSLQVLEITEKFSIMAASHSIATDYGKLDCIAS
IFMSFFSRNQPLAFWKALSPVFNNVFNLHGATLMARENDRFLKQVAFHLLRLAVFRNDSI
RKRAVIGLQILVRSSFCHFQQTSRLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRL
RKSLEEMSDESKSNSLLRECGLFENALEAVPERLAENKWSWSEVKRLSDSILLALDASLE
HALLGSMMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAV
AGVIMQALVARNDGVWSKDHVIALRKICPMVSSEITSEASAAEVEGYGASKLTVDSAVKY
LQLANKLFSQAELFHFCASILELVIPVYKSRRAYGQLAKCHTLLTNIYESILEQENSPIP
FTDATYYRVGFYGEKFGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGSHTLHVIPD
SRQVKADELQPGVCYLQITAVDAVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFT
KNGKTQGGLEDQWKRRSVLQTEGSFPALVNRLPVIKSESLEFSPVENAIGMIETRTAALR
NELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQL
IAALLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggttggttggactttttggactcgtctcttgactcctgtcttcgctggctcg
ctctctgctgcttcgaagctcggagttgctgcttcttgtcttctaggtctcaacactgaa
tctatcatcacttccactacattgttccttttcaagatctccggtcgcttcgcatgcttg
tttcagcttgaatttggaggtcgaatggatgttggcggtagtagtggtggcaatgggggc
cagcggttccgcagaatacctcgtcactcctattctcacgtcaaattggaccccttgatt
gatgaaaatgtggagcagtggccacatctgaatgaactgattcagtgctaccaaagtgac
tgggtgaaggatgaaaacaagtacgggcactatgaaagcatcaatcccagttcttttgaa
aatcagatatttgaagggcctgatactgatatcgagacagagatgcgacttactagtgca
aggcaaactaaggcagaagaatatacggacgatgacaacccaagtacctcaggcaggcag
tttacagaggtggaatcatcactgccacttggtttgaagcattttggacaatcgcctctc
cctgcttacgaaccggcttttgactgggaaaatgaaaggtcaactatatttggccgaagg
attccagaaactcctatggcacaatatggcagtggattgaagatatctgtgaaagtactt
tctctatcatttcaagcaggactagttgagaccttctatggcacaatttgcttatataac
aaagagagaagagaaaagttgtctgaagatttttatttctgcatattgccaactgaaatg
caggatggaaacgtttcttatgaacctcgtggggttttctctttagatgctccatcagca
tcagtttgtctgctgatacagttagagaggccgactacagaagagggaggcgtttcttcg
tctgtttattcacgtaaagaacctgtgcacctgacggaaagagaaaagcagaaattgcag
gtgtggtctcgaataatgccttatggagagtccttttcctgggctattgttccattattt
gataacagcataggtggaacttctggcgggtctgcatcccctagcagtcctcttgctccg
aatatgtccgggacgagctctaatgacggtgtgtttgagcctattgcaaaagtaacgtca
gaggggaagttgggttattcaagtggaaattccgttattgttgaactatctaatttaaac
aaagttaaggaaagctatactgaggattcacttcaggatcctaagcgcaaggttcataaa
cctgtgaaaggtattctaagacttgaaattgagaagcatcagacggaccatactgacttg
gaaaatatatctgaaagtggcagtgtgaccaatgacttcattgaccctggggatcgtatg
gttgattcaacgttaaaaaaaagccctagcgatggcgctgatgtgcctcagagtagcaac
tccaagtggagtaactatgatgggaaagaaatatctggaaatggatcaaatgcccgtggc
aatccagatttgagtgttgatgatttccaagcttttgacttccgtacgacaacgcgaaat
gagcctttcatgcagctttttcattgtctatatgtttatcctttaactgttagcttaagt
cggaaaagaaatttgttcatacggattgaattaagaaaggatgatatggatattcgtcgg
cagcctttagaggctttgtatccaagagagccaggcacatcactccagaagtgggctcat
actcaagttgctgttggagctagagttgccagctaccatgacgagattaaactttcgctt
cctgttatctggacgccatctcaccaccttcttttcactttcttccatgttgatcttcaa
acaaaactagaagctccaaagccagtggtaattggatatgcagcgcttccattatctaca
catgcccagttgagatccgaaatttcgttgccaattatcaaagagctagttccacattat
ctccaggagtcgggcaaggagagactggattatttggaagatggaaaaaatgtcttcaga
ttgcgcttaagactatgttcttctttataccccataaatgaaaggattagagactttttt
ctcgagtatgataggcacactcttcgaacgagtccaccttggggttccgaacttctggag
gctattaacagtttgaagaatgtggattctactgctctgcttcagtttcttcacccaatc
ttgaatatgcttctccaccttataggcaatggtggagaaaccctgcaggttgctgccttc
agagccatggtcaatatcttaacgcgtgtgcagcaggagtctgttgatgatgctgaacga
aatcgttttcttgttaactatgtcgattatgcttttgatgactttgggggtcggcaactg
ccagtatatcctggtttgtctactgtgtggggaagtttggctcgtagtaaggctaaaggg
taccgtgttggaccagtgtatgatgatgtattggcaatggcttggtttttccttgagcta
attgttaaatccatggcattggaacaaactcgtcttttctatcacagtcttcctttaggt
gaagatgttccgccaatgcaattgagggaaggtgttttcagatgtataatgcagttgtat
gattgccttctaacagaagtacatgagcggtgtaaaaaggggctaagcttggcaaaacgt
ttgaacagcagcttggcttttttctgttatgatcttttgtctgtcattgaacctcgccag
gtttttgaactggtgtctttgtacttggacaagttctctggagtgtgtcaatcggttttg
catgattgcaagcttacttttttgcaaattatttgtgaccatgatctttttgtggagatg
cctgggagagacccttctgatagaaactacctatcatctgtcttaatacaagagcttttc
ctcacttgggatcatgacgatctttcgcagagggcaaaggcggctagaactttagttgtt
ctcttgtgcaaacacgagtttgatgctcgatatcaaaagcctgaagataagctatatatt
gcacaactatattttccacttattggccagattcttgatgagatgcctgtcttttacaat
ttgaatgctgttgaaaagcgcgaagctttaattgttattttgcaaatcatgcgcaatctg
gatgatgcatcacttgtcaaagcatggcagcagagcattgctcgaactagattgtttttc
aaactcatggaggagtgcttatctctatttgagcacaaaaaaactgctgatatcttgcta
ttgggctctagttctcgcagtcctgtaggagaaggacctggttcgcccaagtattctgat
agactttctcctgctatcaacaactatttgtccgaggcatcacgacaagaagtcagacct
cagggaacacctgacaatggatacttgtggcaaagagtgaattcgcagttgagctcccct
agccaaccatactcattgagggaagctcttgctcaggcgcaatcttcaagaataggagcc
tctgcccaggcacttagggaatctctgcacccagtattaaggcagaaactggagctttgg
gaagaaaacttgagtgctgctgttagtcttcaggttttggaaataactgaaaagttttcc
attatggctgcatcccatagcatcgcaaccgattatggaaaacttgattgcatcgcatcc
atttttatgagcttcttttctcggaaccagcctttggctttctggaaggctttgtctcca
gtcttcaacaatgtatttaatcttcacggggcaacactaatggccagggagaatgatcgt
ttcttaaagcaagttgccttccatcttcttaggcttgcagttttccgtaatgatagcatc
aggaaaagagctgttattgggctccagatacttgtgaggagttctttctgccactttcag
caaacatcaaggttgagggtcatgctgactatcacattgtcagagctaatgtctgatgtg
caagtgactcagatgaagtctgatggaacattggaagagagtggtgaggcacgacgcctt
cgtaagtcgttggaggaaatgtcagatgaatccaaaagcaatagcttattaagggagtgt
ggattgtttgagaatgccctagaggcagttccagaaagattggccgagaacaagtggtca
tggtcggaggttaaacgtctctctgatagtattcttctggcccttgatgctagccttgag
catgcacttttgggttccatgatgaccatggatagatatgcagctgcagagagcttctat
aaacttgcaatggcatttgcccctgttccagatcttcatataatgtggttactgcattta
tgtgatgcacatcaggaaatgcagtcttgggctgaggcagcacaatgtgctgttgctgtt
gctggtgttataatgcaggcccttgtggctagaaatgacggtgtgtggagcaaagatcat
gtgatcgctcttcgtaagatttgtccaatggtcagcagtgaaatcacatctgaagcatct
gcagctgaggtagaaggatatggtgcttcaaagctaacagtggactctgctgtgaaatac
ttacagctagcaaataagcttttttctcaagcagagctctttcatttttgtgctagtatt
ctggaacttgtgatccctgtttataaaagcaggagggcgtatggacagctggctaagtgt
cacacattactcacaaatatttatgaatcaattctggagcaggaaaatagcccaattcca
ttcactgatgccacatactatagggtgggattctacggtgaaaaatttggcaaactggac
aggaaagaatatgtttaccgagagcctcgtgatgtacgcttaggtgacataatggagaag
cttagtcatatttacgagtctaggatggatggcagtcacactttacacgtaattccagat
tctaggcaagtgaaggcagatgaactgcagccaggagtctgctacttgcagataactgct
gttgatgctgtcatggaagatgaagacttgggaagcaggagagagagaatcttttctctt
tctactggaagtgtccgtgcacgagtctttgaccgcttcttgtttgataccccttttacc
aaaaatgggaagacccaaggtggtttggaagaccaatggaagagacgatctgttctacag
actgagggctcattccctgccctggtgaataggctgccggtaattaaatctgaatctctt
gaattctcacctgtagagaacgccattggaatgatcgaaactcgaacagctgctttacga
aatgagcttgaagagcctcgcagttctgaaggagatcaactcccacgtctccagagcttg
cagagaatacttcaagggagtgttgcagttcaagtgaatagtggagtcctcagtgtgtgt
acagccttcctgtctggtgaaccagccacaaggttgcgatcacaggaattacagcaactg
attgctgcattgctcgagttcatggccgtctgtaagcgtgccattcgggtgcattttaga
ctgattggggaggaagaccaggatttccatacccagcttgtaaatggatttcagtctctc
actgcagagttatcccattacatccctgccattctctccgagctctga
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