Tripterygium wilfordii (thunder duke vine): 120016394
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Entry
120016394 CDS
T07256
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120016394
Membrane trafficking [BR:
twl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120016394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
120016394
NCBI-ProteinID:
XP_038725069
LinkDB
All DBs
Position
15:complement(2621743..2630816)
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AA seq
1394 aa
AA seq
DB search
MASNPPFQVEDQTDEDFFDKLVDDDFGPTATADSAPKSTEGNDSDDARAFSNLSLGEESG
GEGGFEEPKKENVSLDATAGSLEVPAEEESNSNPQAVDSIIESSLENNVDKSDMDLRVSK
SGSGAPGAVKEVGWNSFYADSEQNDSHGFGSYSDLFGDLGDNETASNEAKIVSNNEGYEA
NVVGDSANYAQYQDGQVFDTNGQDLNSSQYWENMYPGWKYDPSTGRWYQVEGYDATANVQ
GAHDASSVSDWTAVDWKSEVNYMQQSAQSVVGTVTGTNTSQSVSSWNQVSQGNNGYPEHM
IFDPQYPGWYYDTIAQEWRSLESYTSAAQSSSFEAQAHDPQNQNGPTSTGSHSQNSTGMS
GEQGQTNDYGSQNHISHNQRGSWTDSYANYSQQGFNMWQPDKVTKTEVFSSYSGNKQPEV
SYDAQVSVKNHVDQQESFNTLSTGLSYETPSRGHAEANGFISSQGFVPRNLSTHFDQTNV
KQNEQVHFSNDYYDSQKPVNIGQQSFQSSQQFTYAPNVGQSSAGRPPHALVTFGFGGKLI
VMKETTSLNSSYGGQNSVGGTISVLNLMEVVTANNDASNIGAPTCDYFHALCHQSFPGPL
VGGNVGNKELNKWIDERISNCSSPDMDFRKGEVLKLLLSLLKIACQHYGKLRSPFGTDTA
LGESDIPETSVAKLFAYAKRNGNQYSQYGALNQCVMNFPSEGQIRATASEVQNLLVSGRK
IEALQCAQEGQLWGPALVLASQLGEQFYVETVKQMALLQLVAGSPLRTLCLLIAGQPKDV
FVTGATAEATVPGAMNMPQQFAPSGANGMLDDWEENLAVITANRTKDDELVIIHLGDSLW
RERSETTAAHICYLVAEANFESYSDTARLCLIGADHLKYPRTYASPEAIQRTEFYEYSKV
LGNSQFMLLPFQPYKLIYAHMLAEVGKVSDSLKYCQTVLKSLKTGRAPEVETWKQLVLSL
EERIRTHQQGGYAANLAPAKIVGKLLNFFDSTAHRVVGGLPPPAPTTLQGSVQTTDHYHQ
PMGPRVSASQSTMTMSSLMPSASMEPISEWAADGNRKTMPNRSVSEPDFGRSPRQVDSSK
EATSSSAQAKAGGTSRFSRFGFGSQLLQKTVGLVLRPRSDRQAKLGESNKFYYDEKLKRW
VEEGVEPPAEEAALPPPPTTAFQNGTPDYNLKSILKNEGSPPDRSPKFKKHASSENASGI
PPIPTSSNQFSARGRMGVRARYVDTFNRGGGRPANSFQSPSFQSVKPAGAANTKIFIPAP
APASEQTMGAIAESINEDAAPNGNPSSSTITDPLQTTPSSSSISPMQRFPSMDDISNKRP
MINGEGPHPPHSRRTASWSGNFNDSISPPKIGETKPLGEALGLSPSSSMTNGPSMMGMPT
RGGSFGDGLHEVEL
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattccaagtggaggatcagacggatgaggatttcttcgacaaa
ttggttgatgacgatttcggacccactgccaccgccgattcggccccaaaatctacagag
ggtaacgattctgatgatgccagggcgttctcgaatctcagtttaggtgaggagtcgggc
ggtgagggagggttcgaggagcccaaaaaagagaatgtctctctggatgccacggctgga
tcgttggaggtccccgcagaagaagagagtaactcaaatccgcaagctgttgacagcata
attgagtctagtcttgaaaacaacgtggataagagtgatatggatttgagagtaagcaaa
agtggatctggagctcctggggcagttaaggaggtgggctggaattctttttatgctgat
tcggagcaaaatgacagtcatgggtttgggtcttactcggatctttttggcgatttgggg
gataatgagactgcgagtaatgaagccaagattgtctccaataatgaaggatatgaagca
aatgtggtgggtgattcagccaattatgcacaataccaagatggtcaagtttttgataca
aatgggcaggatctgaatagcagtcagtactgggagaatatgtatccaggttggaaatat
gatccaagtacagggcgatggtatcaggttgaaggctatgatgccacggcaaatgtccaa
ggggcccatgatgctagttcggtcagtgattggactgctgttgattggaaatcagaggtt
aattatatgcaacaaagtgcacagtcagtcgtaggaactgtgaccgggactaacactagc
caaagtgtgtctagctggaaccaggtttcacaagggaacaatggttacccagagcatatg
atttttgatcctcaatacccgggctggtattatgacacaattgcccaagaatggcgctca
ttggagagctatacttcagctgctcaatcaagttcatttgaagcacaagctcatgaccca
cagaatcagaacgggcctacttctactggttctcattctcagaatagtactggtatgtct
ggtgaacaagggcaaactaatgactatgggtctcaaaatcatattagccataaccaacgt
ggtagctggactgattcatatgctaattacagtcagcagggttttaacatgtggcaacct
gataaagtaactaagactgaggtcttttcaagttacagtggaaataagcagccggaggtt
tcttacgacgctcaggtttctgtaaaaaaccatgtggatcagcaggagtcttttaatact
ttaagcaccggtttgtcttatgagacaccaagtcgaggacatgctgaggctaatgggttc
attagctcacaagggtttgttcctagaaatttgagtacacattttgatcagacgaatgtt
aaacagaatgaacaagttcatttttcaaatgattactatgacagtcaaaagcctgtaaat
ataggccagcaatcatttcagagtagtcagcagtttacttatgctcccaatgtggggcaa
tcatctgctggtcgccctccacatgctttggttacttttgggtttggtgggaagctcata
gtaatgaaagagactacttcactcaactcttcctatggtggccagaactctgtaggaggc
acaatttctgtgctgaatttgatggaagttgtaacagcgaataatgatgcctcaaatatt
ggagcgcccacttgtgattattttcatgctctgtgccaccaatcttttcctggccctctt
gttggtgggaatgtaggaaacaaagagctaaataaatggattgatgagaggatttctaac
tgtagctcccctgacatggattttagaaaaggcgaagtgctgaagttgcttctctcgttg
cttaaaatagcatgccaacattatggaaaacttagatctccttttggcactgacactgca
ttgggagagagtgatattccagaaacttcagttgctaaactttttgcatatgccaagagg
aatggtaaccaatacagtcagtatggggctcttaaccagtgtgtaatgaattttccatct
gaaggacaaatacgggcaactgcttctgaggtacagaatctgttggtttctggtagaaaa
atagaggctttgcaatgtgctcaagaaggtcaattgtggggtcctgcacttgttctagcc
tcgcaacttggtgagcagttctatgttgaaacggtgaagcaaatggcattactccaactg
gtagcaggatcaccattgcggacattatgcctcctaattgctgggcaacccaaagatgtt
tttgttactggtgcaacggctgaggccactgttcctggtgctatgaatatgcctcaacaa
tttgcaccgtctggggcaaatggcatgctagacgattgggaagagaatttggctgtaata
actgcaaacagaacgaaagatgatgaacttgtaattattcatctgggagatagcctatgg
agggaaagaagtgagactactgctgcgcacatctgctatttggttgcggaagcaaacttt
gagtcatattctgatactgcaaggctctgtctcattggagcagatcacttgaagtatccg
agaacctatgctagtccggaagctattcagaggactgagttctatgaatattcaaaggtg
ctaggaaactctcagtttatgcttctgccatttcagccatacaagctcatttatgcacat
atgctggctgaagtaggaaaagtttcagattcattgaagtactgtcaaacagtattaaaa
tcactaaaaactggtcgggcacctgaagtggagacatggaaacagttagtgttgtctctt
gaggagaggattagaacccatcaacagggtggatatgcagctaatttagcaccggcaaaa
atagttggtaaattgctcaacttctttgatagtactgcacatcgggttgttggtgggctg
cctcctcctgctcctacaactttacaaggaagtgttcaaactactgatcattatcatcaa
ccaatgggcccaagagtatcagctagtcaatcaacgatgaccatgtcatcattaatgcct
tctgcttcaatggagccaataagtgagtgggcagctgatggcaatagaaagacaatgcca
aatagaagtgtgtcagagccagactttggtagatcccctagacaggttgattcatcaaag
gaagcaacctcatctagcgcacaagccaaggctggagggacatctcgcttttctcgtttt
ggttttggttcacagcttttacagaagacagtggggttagtcttaaggccccgctcagat
cgacaggctaaattgggggaaagcaacaagttctattatgatgaaaagcttaaaagatgg
gtagaagaaggtgtggaacccccggctgaagaagcggccctgccacctcctccaacaact
gcatttcaaaatggaacacctgattacaacttgaaatctatattgaaaaatgaaggttct
cctcctgacaggagtccaaaatttaagaagcatgcatcatcagagaatgcttcagggata
ccacctattccaaccagctcaaatcaattttcagctcgtggacggatgggcgttcgagca
aggtatgttgacacattcaaccgaggtggtggaaggccagcaaactcgttccagtctcct
tcatttcaatctgtcaaacctgcaggtgcagcaaatacaaaaatttttattcccgcacct
gcaccagcaagtgaacagacaatgggggccatagcagaaagcataaatgaagatgctgca
ccaaatggaaatccttcgtcatcaaccatcactgaccctttgcagaccaccccatcatca
tcatcaatatctccaatgcaaaggttcccaagtatggatgatatctcgaacaaaagacca
atgattaatggagagggtccccacccacctcattcacgtcgaacagcatcatggagtgga
aacttcaacgattcaattagccctcctaagattggtgaaacaaaacctctaggggaggca
ttgggattgtccccatcatcttctatgaccaacggaccttctatgatgggaatgccaacg
aggggtggcagttttggggatggccttcatgaggtggagctttga
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