Tripterygium wilfordii (thunder duke vine): 120016434
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Entry
120016434 CDS
T07256
Name
(RefSeq) uncharacterized protein LOC120016434 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120016434
09123 Folding, sorting and degradation
03018 RNA degradation
120016434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120016434
03041 Spliceosome [BR:
twl03041
]
120016434
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120016434
mRNA cycle factors
Stress granule specific factors
120016434
Spliceosome [BR:
twl03041
]
Complex C
Other components
Complex C specific factors
120016434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MLLE
Motif
Other DBs
NCBI-GeneID:
120016434
NCBI-ProteinID:
XP_038725132
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All DBs
Position
15:13091275..13096748
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AA seq
403 aa
AA seq
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MDSIWSYDQSKVNTVENNMDITLRLGMPYSVQSYSWNSQTITHDIIPSRLNINTIGSSNQ
SQRAVDSIWAYDQTNHNSVENNMDITQRLGLLNSDRRYSWNRLTLTPNDIIPSLPNINAI
GSFGQQSQRAGDSIWAYDQTNHNSLVENNMDITRRLGLLNSNQRYSWNRHTITPNDIIPS
RPNINAIGSFGQLSQRPVAQHGLGSAQWTQQPLALLPRGHLNHYLPGCNTPMRNAGVGQA
MHRTPYVQQGWGQQHGVHCGQGFVQQHQRHVRSNLQQMFPRGCFHCYPPRFNTRVPGFTG
ALPFQVSVGTMAGALATATHEQQRIMLGELLYPRVEQFVPDVAAKVTGMLLEMDRKEILF
LLESPNALSLKVAEAIAVLREANQQQKDNLAGQLGFVSLNDQD
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggactctatttggtcatatgatcaatccaaggtcaacactgtagaaaataatatggac
atcaccctgaggttgggaatgccctattctgttcagagttatagttggaacagccagact
atcactcatgacataatcccttcccgcctcaacatcaataccattggctcatctaatcag
agtcagagagcagtggactctatttgggcatatgatcaaaccaaccacaatagtgtagag
aataatatggacattacccaaaggttgggactgctcaattctgatcgaagatatagttgg
aaccgcctgactctcactcctaatgacataattccttccctacccaacatcaatgccatt
ggctcatttggtcagcagagtcagagagcaggggactctatttgggcatatgatcaaacc
aaccacaatagtctagtagagaataatatggacattacccgaaggttgggactgctcaat
tctaatcaaagatatagttggaaccgccatactatcactcctaatgacataattccttcc
cgacccaacatcaatgccattggctcatttggtcagctgagtcagagaccagtggctcaa
catggattaggatctgcgcaatggactcagcaaccactggcactgttgcctagaggacat
ctgaaccattacctccctggctgtaacacgccaatgcgaaatgctggagttggacaagca
atgcatagaacgccatatgttcagcagggctggggtcagcaacatggggtccattgtgga
cagggatttgtgcaacagcatcaacgacatgtccgttcaaaccttcagcagatgtttcct
aggggctgttttcattgttatccgcctcgttttaacacgagagtgccaggttttaccgga
gccttgccatttcaagtcagtgtaggaacaatggctggtgcccttgctactgcaactcat
gaacaacaaaggataatgttgggtgaacttttatacccacgcgttgaacagtttgtgcct
gatgtggcggccaaggtgaccggcatgcttctggagatggaccgtaaagagattttattt
ctgcttgagtcaccaaatgctttgagtttgaaagttgctgaggccatagcggtcctaagg
gaagctaatcagcagcagaaagacaacctggctggtcagttgggatttgtgtccttgaat
gatcaggattga
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