Tripterygium wilfordii (thunder duke vine): 120016569
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Entry
120016569 CDS
T07256
Name
(RefSeq) uncharacterized protein LOC120016569
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120016569
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120016569
Surveillance factors
Other surveillance factors
120016569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
120016569
NCBI-ProteinID:
XP_038725332
LinkDB
All DBs
Position
15:complement(13863188..13871301)
Genome browser
AA seq
1625 aa
AA seq
DB search
MADGKLNLPEDLFSSKSPDERFSVKGEAWVGNGEDKDLMGLLDEAKDRVTSESSIPLSPQ
WLYAKPMDSKMLGSGTTGDTRSPNTLAHGNLADPNLKESWHLDGSQEKKDWRRASAEVDS
GRRWREEERETVPLGRNRKKDDHRVDAMSARYNSESRVMSSDRWHDVANRNSDHDSRRDS
KWSSRWGPEEKEKDIRNEKRTDAEKEDNDKQNIVGNNRVASERDNDSRDKWRPRHLMEVH
AVGSAAYRTAPGFGLERGRVEGSNTRFAPGRGRATGNGSLQIGMPPCAPGIGSLLSVKNG
KYCYPRGKLLDIYRNQKSAPNFTAIPEGMDHLLPATQVDPVKPLAFVVPNIEEESVLGKI
WSGKITSSGVFGESVRDKYTMLNDNSTGINDVSLAEEKQAKEKQISLTDAKETIDSSNKA
GVNRFCKGDVEASHVSGTQFVMTEERDALKGEQKLAANDVSNNAIESGPGNSVRELTVSS
KIAAVDMDFSANSKLGDIDGPTSFEIGSQLPDDSNSFYDFSSLHQNLSGDSLRLKRGDEG
PSLESGIPPEELSLYYLDPQGNIQGPYLGIDIITWFEQGYFGTDLLVRLSDAPEQLSFQE
LGEVMPHLKIKSRSASSADLPTRPTLSDFVGGSLEESALDPASASDFKGLDYRENQHWSS
SGFDVMSSVSVEAGAPDHSYRTDVQYDESFRNFVAQDEEIVFPGRPRSSTSIPLMGPDDR
HDSVSNPTGQSSLATKFSETSLPQHQDDRLLPFGLPLSELRSNSHLRGDQTSNIVTGVGE
QDHRRDSFFEKDTGFTSHRSFGAMADQIPLVGTRSSDYKNKQFSGPNINSGPIDAQHISH
REQEFNDFDLANHLMAQKLQKKQLQRHDLLSSHPFAQTSGLEEDQMPGFTPSELPNFQSS
VHYPFPNMDGLLELQFQQQRQLELQQQQRQFELQQQKRLLLMQQQQRQEQLRHHQIKLLE
KQQQQHQSQVQQLLFEQMLQHPMSDIGYGQPNMDPVKDNFLDQAQLRMLLLRELQQNSHT
SRHFDPSLEQIFQAEISQSALREREVHYLDLLSQVKHGEMHPSERELRLRQQQFEVQRLS
MELRQQLGMDGERHFGGPWLVDETGHFQRDHAGGHHSFSAGINTLDFYQQQQRFPSHEEQ
LAHSNRGHILQEHHQRGFYEPNSQAFDRSISLPAVNSGIKLDNANASARGLDLEHLYMHS
ADRLSSFTSSASAVGRQVLDDFCGSHPQAMAMELSGNNRQLDNSSIEGRMQQLHLEAERQ
RKFPDSTIISPDLDMWGLAGTHEENSKQALMDLHQKSCIQSMQSSEVDPEHHISSSDTGE
ILEPISESFSSRVPFNRFTDRLVFEAMNRQFNHQGNSEGLPLISNSAALLEDSFMSGDSD
MTGRGIVERDGKGRRNDSQGITAMNRSFLERENDLVAEAEGAMDFRELPINAHSRHGSIS
SAGGNGSLYSYDMGLDKSVEEEVFNDRQSSILSKGLASNRRPPISLALSSRDVSSELASS
PLIKLKNSTNIATSDDVNRASTGAAQNARIQASGSREVHFRRTSSCSDAVVSEASFIDML
KKPVPLDAEELNAATMDSCDGAAGAVTGKNVKKKGKKGRQIDPALLGFKVSSNRILMGEI
QRLDD
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaaagctcaatcttcccgaagatctcttctcctccaagtctcctgatgag
cgcttctccgttaaaggtgaagcctgggtaggaaatggcgaggacaaggatcttatggga
ttgcttgatgaggctaaagatcgagtgacttcagagagcagcattcctctttctccacaa
tggctttatgctaagccaatggattctaagatgttaggtagtggaacaacaggggacaca
cgttcaccaaacactttagcacatggaaaccttgctgaccccaacttgaaagaaagctgg
catttagatggatctcaggaaaagaaagactggcggagggcttctgctgaggttgacagc
ggtcgccgctggcgtgaggaagagagagaaacggtcccgcttggtagaaatcgcaaaaaa
gatgatcaccgtgttgatgccatgtcagctaggtataactctgagagcagagtcatgtct
tcagatcgttggcatgacgttgctaaccgtaattctgaccatgactcccggcgagacagc
aagtggtcatcaaggtggggcccagaagaaaaagagaaggatattcgaaatgagaagagg
acagatgcggaaaaggaagacaatgacaaacaaaacattgtcggcaacaaccgggtggct
tctgaacgtgacaatgactctcgtgacaagtggaggccacgccatcttatggaagttcat
gcggttggctctgctgcatatcgtactgcgccaggttttggcttggagagaggacgagtg
gagggctctaatacacgttttgctcctggacgaggaagggctactggtaatgggagcttg
caaattggcatgcctccctgtgctcctggtatagggtctcttctttcggttaagaatggc
aagtactgctatccaaggggaaaacttcttgatatctaccgtaatcagaagtctgctcca
aattttactgccatacctgaagggatggatcatttattgccagcaactcaagtagaccct
gttaagccattggcttttgttgttcccaatatagaagaagagtctgtccttggaaagata
tggtcgggaaaaattacaagcagtggggtttttggtgaatcagttagagacaagtataca
atgttaaatgataatagtacaggcattaatgatgttagtttagcagaggagaaacaggcc
aaggagaagcagatttccttgactgatgctaaagaaactatagattcttctaacaaggct
ggtgtaaataggttctgcaaaggtgatgttgaggcatctcatgtgtctggtactcagttt
gttatgactgaggagagggatgcacttaaaggtgaacagaaactggctgcgaatgatgtt
tctaataatgcaatagagagtgggccaggaaacagtgttcgtgaactcacggtctccagt
aaaatagcagctgtagatatggatttttctgctaactctaagttgggagatattgatggt
cctacttcttttgaaattggtagccagcttcctgatgattcaaattccttttatgacttt
tcttctctgcatcaaaatttgagtggtgactcactccgactaaagaggggtgatgaagga
ccttcattggaaagtggtatcccaccagaggagttaagtctgtactatcttgatccgcaa
ggaaatatacagggaccatacttggggatcgacatcattacatggtttgagcaaggatat
tttggaaccgacctactagtccgtttgtctgatgcccctgagcaattgtcttttcaagaa
cttggtgaggtcatgccacatttgaaaatcaaatctaggtctgcttccagtgctgattta
ccgactaggccaacactgtctgattttgtgggaggcagtttggaggaaagtgcactggat
cctgcttctgcttctgactttaaggggttggattatagggagaaccagcattggtcttca
tctggatttgatgtgatgtcaagtgttagtgttgaggctggagcacctgaccacagttat
cgcaccgatgtccagtatgatgaaagcttcagaaattttgttgctcaagatgaagagatt
gtctttcctggaaggcctagaagtagtactagtatccccttgatgggacctgatgacagg
catgattcagtttccaatcccactggtcagtcttcccttgcgactaaattttcagaaact
agcttgcctcaacatcaggatgataggttgcttccatttggtctgccattgtctgaactc
aggagcaattctcatttgaggggtgatcagacatcaaatattgttactggtgtgggtgaa
caggatcacaggagagattctttctttgagaaagacactggttttactagtcacaggtct
tttggtgcgatggctgaccaaattccacttgtggggacgcggtctagtgattataaaaac
aaacaattttctggtccaaacataaattctgggccaatagatgcccaacacatatctcac
agggaacaagagttcaacgattttgacttggcaaatcacttgatggctcagaaattgcag
aagaaacaacttcagcgacatgatcttttatcttctcatccttttgcacaaacctctggg
ttggaggaggatcagatgccaggttttactcctagtgagcttcctaatttccagtcttcg
gtccattatccattcccaaatatggacgggcttttggaacttcagtttcaacagcagcgg
caacttgagctccaacagcagcagcggcaatttgagcttcaacaacagaagaggctactg
ctgatgcagcagcaacagcgacaagagcaactccgtcaccatcaaataaaattactggag
aaacaacaacagcaacatcagtctcaagttcagcaattgctttttgaacaaatgctgcag
catccaatgtctgatattggttatgggcagccaaatatggatcctgtgaaagataacttt
cttgatcaggcgcagttgaggatgctacttcttcgagaactacaacagaattctcatact
tcaaggcattttgatccgtcattggagcagatattccaagcagagatcagtcaaagtgca
cttcgggaacgggaggttcattatttggacctcctatcacaagtgaagcatggtgaaatg
catccctcagaacgcgaacttcgtttgcggcagcaacagtttgaggttcagcggttatct
atggaattgaggcagcaattgggaatggacggggaaaggcattttggtgggccgtggttg
gttgatgaaactggtcactttcagcgggatcatgctggtggtcatcattctttttctgca
ggaattaatactttagatttttatcagcaacaacagaggtttccttctcatgaagagcag
ttggctcacagtaacaggggtcatattttacaagagcatcatcagcgtgggttttatgag
cctaactctcaagcatttgacaggtcaatttctcttcccgctgttaattcagggataaag
ttggacaatgcaaacgcatctgcccgaggtctagatttagaacatttatatatgcactct
gctgaccggttgagttctttcacttctagtgcatctgctgttggtcgacaagttcttgat
gacttttgtggttctcatccacaagctatggcaatggaactctctggaaataacaggcaa
ctagacaatagctcgattgaaggaaggatgcaacaattgcatcttgaagctgagaggcaa
agaaaatttccggacagtaccataatttctcctgatttagatatgtgggggttagctgga
actcacgaggaaaactccaagcaagctttgatggaccttcaccagaaatcgtgtattcag
tctatgcaatcatcggaagttgatcctgaacatcatatatcatcttctgatactggggaa
atccttgaaccaatttccgagtcattttcttcacgtgttccatttaatcgtttcacagat
cgtttggtctttgaggcaatgaacagacaatttaaccatcagggaaacagtgaagggttg
cctctcatatcgaattctgcagcattattagaagactcgttcatgtcaggtgatagtgat
atgactgggagaggcattgtagagcgggatggaaaggggaggaggaatgattctcaaggc
ataactgcaatgaacaggtcatttttggagagggaaaacgacttggtggcagaagcagaa
ggtgccatggattttcgagagttgcctattaatgcacatagcaggcatggttctataagt
agtgctggtggaaatggaagcctgtacagctatgatatgggattggataaatcagttgaa
gaggaagttttcaatgacagacagtcgtcaattttgagcaaggggcttgcttcaaataga
cgcccgcctatatctctggctctatcttcacgggatgtttcatcagagctggcttcctcc
ccactaattaagctgaaaaattcaaccaacattgcaacttcagatgatgtgaatcgtgcg
tccactggggctgcccaaaatgctcgaatacaggcatctgggagtagagaggttcatttc
cggaggacttcatcttgcagtgatgctgttgtatcagaggcatcatttattgacatgctc
aagaaaccagttcctttggatgctgaagaattaaatgctgctacgatggattcttgtgat
ggagctgcaggtgcagttacaggtaaaaatgttaaaaagaaagggaaaaaagggaggcaa
atagaccctgctctccttggcttcaaggtctccagcaaccggatcctgatgggtgaaatc
caacgccttgacgattga
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integrated database retrieval system
