KEGG   Tripterygium wilfordii (thunder duke vine): 120016625
Entry
120016625         CDS       T07256                                 
Name
(RefSeq) protein SPA1-RELATED 2-like isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:twl00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    120016625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:twl04121]
    120016625
Ubiquitin system [BR:twl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    120016625
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Pkinase Beta-prop_IFT140_1st WD40_like WD40_RFWD3 Beta-prop_WDR35_TULP_N PK_Tyr_Ser-Thr
Other DBs
NCBI-GeneID: 120016625
NCBI-ProteinID: XP_038725408
LinkDB
Position
15:1829123..1837845
AA seq 1074 aa
MLNCEGMDEGLVDEVAPVDVAEVAHIHTKESNYPLISENCDIVEPQDLLIHRENDYTESS
FDVLANILEGEDVDGRVDYVNASKGRCASPRYMDDAGNMVEELMVRDDSTSNLAVVGTSN
NREKLQTRQNRWQNLYQLAGGSGSASSRGNSIQRDDGQAMPSSQEDVGCSSFSEYLVKKP
PSDCRNAVMERTDPENKGVISGLPSHGGIRTKILSKSGFSQFFVKNTLNGKGIICSGPPQ
NYTRIVPKEQNNAKAAVCSVVAPSASMDLNAQNRIPYSCYTRAVPGGSTHNGVNLREWLN
ARHEVNKTESLNIFRQVLDLVDHFHLQEVALLELQPSSFKLFQSNQVKYLGSTLQGEMSE
SATDPENPFLGNCLIKRRTLDQGMFPSVGLCAKKQKFSENRNLSTWRPYCPSKYDFKLET
ANDNESKVADAQNSRDEYDQSHHIFESGIQRKSSGPLAPSTALLQSASIGLQLEEKWYKS
PEELTEGVCTISSNIYSLGVLFFELLGRFDSERAHDAAMMDLRHRILPPCFLSENPKEAG
FCLWLLYPDPPSRPTTREIVQSQVINGLHNVSLEELSSSIDQDDSESELLLHFLNSLKEH
KEKHVVELVQDIRCVQADIGEIERRNCTKRPLIHPFLNNDLLTTRDASSLHTATSSSEAI
SRSIPKSSPNEMRWVRNINQLEGAYFSMRSKVQHPEIDGSIRPDRDLLRNRENWHSAGDD
EVNQNPTDRVGAFFDGLCKYAHFSKFEACGLLRTGDFNNSANVICSLSFDRDEDYLAAAV
VSKKIKIFEFSSLLNDSVDIHYPVAEMSNKSRLSCICWNNYIKNYLASTDYDGVVKIWDV
STGQGVFQYGEHDKRAWSVDFSQVHPTKLASGSDDCSVKLWSITEKNCLRTIRNIANICC
VQFSGHSTNLLAFGSADYRTYCYDLRNARVPWCVLTGHAKAVSYVKFLDSETLVTASTDN
TLKIWDLNKTSSSGLSPDACSLTLRGHTNEKNFVGLSISNGYIACGSETNEVYAYYRSVA
MPITSHKFGSIDPKSGKETDDDNGQFVSSVGWRGKSDMIVAANSSGCIKVLRMV
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgcttaattgtgaaggtatggatgaaggactggtggatgaagtggctccagttgatgta
gctgaagtggctcacatccataccaaagagagtaactatccattgatatcggaaaattgc
gatatagtggaaccccaggatttactcatacacagggagaatgattatactgaaagttcg
ttcgatgtacttgcaaatatcttagagggtgaagatgtagatggtagagtagattatgtc
aatgcatctaaaggccgatgtgccagtcctcgttacatggatgatgctggtaacatggtt
gaggagttgatggtgagagatgacagtacttcaaacttagctgtagtgggtacatcaaac
aatagggaaaaactgcagactaggcaaaatcggtggcagaatctgtatcaactggctgga
gggtcaggaagtgcaagttcgcgtggcaattctatacaaagggatgatggtcaggcaatg
ccaagcagtcaggaggatgtaggttgctcatctttttcagagtatttggtaaaaaaacca
ccaagtgattgtcgcaatgcagtcatggaacggactgatcctgaaaataaaggggtcata
agcggtttgccttctcatggaggtatccgcacaaagattctatcgaaatctggtttttct
cagttttttgtcaaaaatacattgaacggcaagggtatcatttgtagtggcccacctcaa
aattatactagaattgtgcctaaagagcagaataatgccaaggctgctgtttgtagtgtg
gtggctccaagtgcttcaatggatttgaatgcccaaaataggataccatattcctgttat
actcgagccgtgcctggcggttctacgcataatggagtgaatttaagagagtggcttaat
gcgcgccatgaggtgaataagactgagagcttgaatatatttagacaggttctggatctg
gtggatcactttcacttgcaagaggttgcgttgcttgagttacagccatcttcttttaag
ttgtttcaatcaaatcaggttaagtaccttggatccactctacagggagaaatgtcagaa
agtgctactgatccagaaaatcctttccttggaaattgtttgattaagagaaggacactt
gatcagggaatgttcccctctgttggtctatgtgcaaaaaaacaaaagtttagtgagaac
aggaaccttagtacatggcgaccttattgtccttcaaaatatgacttcaaactcgaaact
gctaatgacaatgagagcaaagtagctgatgcacaaaattctcgggatgaatatgaccaa
agtcaccatatttttgaatctgggattcagagaaagtcaagtgggcctcttgcaccaagt
acagctctgctacagtctgcatctataggtctccagctggaagagaagtggtataagagt
cctgaggagctcaccgagggagtctgcacaatttcatcgaatatttatagcctcggagtt
cttttctttgagttacttggtcgttttgactctgaaagggcgcatgatgcagcaatgatg
gatctgcgtcacaggattcttccaccttgtttcctatcagaaaatccaaaggaagctgga
ttttgtctttggttactctatcctgatcctccgtcacgcccaacaactagggaaattgta
caatctcaagtaatcaatggattgcacaatgtttctctagaggaattgtcatcgtccatt
gaccaagatgattctgaatcagagctattattgcattttcttaattctttgaaagagcat
aaggagaaacatgtggtggagttggtacaggacattaggtgtgtacaagcggatattgga
gagatcgagaggaggaactgtacaaagagacccttgattcatcctttcttgaataatgac
ttgctcactactagggatgcctcatcccttcacacagccacttcaagttcagaagcaatt
tctcgttcaatacctaaatctagtccaaatgaaatgagatgggtgaggaatataaatcag
cttgagggtgcttatttttccatgagatccaaagtgcagcaccctgagatagatggcagc
attcgtccagatagggatttattaagaaatcgtgagaactggcattcagcaggtgatgat
gaagtaaatcagaatcccactgaccgcgttggagctttctttgatggtctgtgcaagtat
gctcattttagtaagtttgaagcatgtgggctactaagaaccggggatttcaacaattct
gccaatgtaatttgctctttgagtttcgaccgggatgaggactatcttgctgcagccgta
gtatcaaagaaaataaagatttttgagttcagttcactcttgaatgattctgttgatatt
cattatccagtagcggagatgtcaaacaaatcaaggctcagctgcatctgctggaacaac
tatatcaaaaattatctggcttcaactgactatgatggtgtggttaagatatgggatgtg
agtactggacagggggtttttcaatatggtgagcacgataagagggcctggtctgttgac
ttttctcaagtacatcccacaaagctagccagtggaagtgacgattgttctgttaagctg
tggagcattactgagaaaaactgtttgcgcacaattaggaacattgcaaacatctgctgt
gtccagttctctggacactccactaatttactggcctttgggtctgcggattacagaacc
tactgctacgatcttcggaatgccagagtcccttggtgtgtgttaactggccatgccaaa
gctgtgagttatgtcaaattcctggattctgaaactcttgtgaccgcatccactgacaat
acactaaaaatttgggacctcaacaaaacaagctctagtggcttgtcccctgatgcttgc
agcttaacacttagagggcacactaatgagaagaactttgttggtttgtccatctccaat
ggttatatagcttgtggttcagaaacaaatgaggtttatgcttactatagatccgtagct
atgcccatcacttcccacaagtttggttctattgatcctaaatctgggaaagagacggat
gatgataatgggcagtttgtgtcaagtgtcggatggagagggaaatcagacatgattgtt
gctgccaactcaagtggttgtatcaaggtgttgcgaatggtttga

DBGET integrated database retrieval system