Tripterygium wilfordii (thunder duke vine): 120016763
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Entry
120016763 CDS
T07256
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120016763
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120016763
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120016763
NCBI-ProteinID:
XP_038725605
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Position
15:complement(1439373..1443490)
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AA seq
438 aa
AA seq
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MDAVKPCRLLSAVVLVVACLIQFIGAQNIAHFDEVWQKRAHEAKKASQAAYHPNPSEVTN
QLNHHIHQTYKGHNNTRRHLRKYEGQCLATNPIDRCWRCDKNWAQNRKKLAGCALGFGRR
ATGGKDGKFYTVTDPSDNDLVNPKPGTLRHAVTRPEPLWIIFAHHMVIRLSEELIVTSHK
TIDGRGAQVFIINGGQITLQFVKNIIIHSLHIRDIKAGNGGTIRDSIDHFGSRTRSDGDG
ISIYGSSDIWIDHISMSNCMDGMIDVIMASTAITISNCHFTHHNDVMLFGGSDSYSDDQV
MQITLVFNHFGQGLVQRMPRCRWGFIHVVNNDYTHWLMYAIGGSKNPTILSQGNRFIAPP
NKNCKEVTKRDYSPESVWKSWNWRSEGDLMMNGAFFVQSGRPVKPPNKKDMIKAKPGTFV
TRLTRFSGTLNCAPNKPC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgttaagccatgcagattgttatcagcagttgttcttgttgtagcatgccta
attcaattcattggagctcaaaatattgctcattttgatgaggtgtggcagaagagagct
catgaagccaagaaggcctctcaagcagcctaccacccaaatccttcagaagttaccaat
caattgaatcatcacatccaccagacctataaaggacacaacaacacaagaaggcaccta
cgcaaatacgaagggcaatgcttggccacaaaccccatcgaccggtgctggagatgtgat
aaaaactgggctcaaaaccgcaagaaactagccggttgtgcgctagggtttggccgaagg
gctactggaggcaaggatgggaaattctacacggtcacggacccatcagacaatgacctg
gtgaaccctaaaccaggcaccctgcgccacgcagtgactcgcccggagccactttggatc
atatttgcccatcatatggtgatcaggttgagcgaagagctcatcgtgaccagtcacaag
accattgatgggcgtggggctcaagtgttcattatcaatggtggacaaatcactcttcaa
tttgtgaagaatatcatcatccacagcctccacatccgcgatattaaggctggtaatggt
ggcacaatcagagactccattgaccacttcggctcccgaacacgtagtgatggagatgga
atctcaatatacggatcctctgacatttggattgatcacatttccatgtctaattgcatg
gatggaatgatagatgtgataatggcgtccactgccattaccatatctaactgccatttc
acacaccataacgatgtgatgctgtttggtggaagtgacagctattcagatgatcaagtg
atgcagataacccttgtattcaaccactttgggcagggattggtgcaaaggatgcccagg
tgccgatggggattcatccatgttgtgaacaatgactacactcattggctcatgtatgcc
attggtggcagcaaaaaccccaccattcttagccagggtaaccgcttcattgcaccccca
aataaaaattgcaaagaggtgacaaagagagactattcacctgaaagtgtctggaagtca
tggaattggagatcagagggagatctgatgatgaacggagccttctttgttcaatctgga
agacctgtcaaacctccaaacaagaaggatatgatcaaggcaaagcctgggacatttgtg
accaggcttactcgcttttcaggcactcttaactgtgctccaaacaagccatgctag
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