Tripterygium wilfordii (thunder duke vine): 120016778
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Entry
120016778 CDS
T07256
Name
(RefSeq) LOW QUALITY PROTEIN: NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
twl03000
]
120016778
04121 Ubiquitin system [BR:
twl04121
]
120016778
Transcription factors [BR:
twl03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120016778
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
120016778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
120016778
NCBI-ProteinID:
XP_038725621
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Position
15:525306..529673
Genome browser
AA seq
1092 aa
AA seq
DB search
MSIQSRNDRARLPARNVRQEWVPRGAAAASAVNPPLTISSNPPGNGTRPNHNNAPPDNRH
RVNNASRGHTGRSSNPRKDRGRSETQTGKMKDENLPQLVQEIQEKLMKGTVECMICYDMV
PRSAPIWSCKSCFAIFHLNCIKKWARAPTSIDLLAEKNQGFNWRCPGCQSVQLISSKEIG
YVCFCGKRPDPPSDFYLTPHSCGEPCGNQLEKEAGDEGKGDLCPHVCVLQCHPGPCPPCK
AFAPPRICPCGKKVITTRCSDRKSVLTCGRHCDKLLDCQRHRCENICHLGPCDPCLVLIN
ASCFCKRKVEVVLCGEMAVKGEVKAEDGVFSCNLICGKTLSCGNHDCVETCHPGLCGDCD
LMPGRVKSCCCGKTSLQEERQSCLDPIPTCSQKCGKALPCGMHHCEEVCHAGDCPPCMVL
VTQNCRCGSTSRNXECHITTMENDKFVCERSCGQKKSCGRHRCSERCCPCSNSYNHYSGD
WDPHFCQMACGKKLRCGQHFCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPP
PSCQLPCSVPQPCGHPSSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLC
GKTRRCGLHACNRTCHPVPCDSPCGPETLSKASCGQTCGAPRRDCRHTCTTPCHPSASCP
DVRCEFLVTITCGCGRLTVTVPCDAGGSSSGFSADTIHEASIVQKLPVPLQPVELNGKKV
PLGQRKLVCDDECAKLERKKVLADAFDITPVNLDALHFGENSVMTELLVDLYRRDPKWVL
SVEERCKYLVMGKSRGTTSGLKVHVFCPMLKDKRDAVRLIAERWKLAIYSAGWEPKRFIV
VHATPKSKAPQRVIGVKGTTTLNTFHLPVFDHLVDMDPRLVVSFVDLPREADISALVLRF
GGECELVWVNDKNALAVFNDPARAATAMRRLDHGSVYYGASMISQSVGALGGSSGSNAWG
GAGSTEEGGALAALKGNPWKKAVVQDPGRREDSWADEEWSSGSAVQVSAWKVNETPIAAS
INRWSAFDSETSSNPAAASVKIEDTTERVENQSKSGLESIATCSSSAGQPNAADVIDNDL
TEVVDDWEKAYE
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcaatcccgcaatgaccgagccagacttcctgcaagaaacgttcgccaagag
tgggtcccgaggggagctgctgcggcctcagctgtgaacccacctttaactatcagttcc
aacccgcctggaaatggtacacgtcctaatcataacaatgcgccacctgataataggcac
agggtaaacaatgcttccaggggccacacaggtcggtcttcaaatcctaggaaggatagg
gggaggagtgagactcagactgggaaaatgaaggatgagaatttgcctcaacttgtgcaa
gaaatccaggagaaactcatgaagggtaccgtcgaatgtatgatttgttatgatatggtg
ccaaggtctgctcccatttggtcgtgcaagagctgttttgcaattttccatttgaattgc
atcaagaaatgggctcgtgcgcccacttctattgatctattggctgagaaaaatcagggt
tttaattggcggtgccctggttgtcaatccgtacagctcatttcatcaaaggagattggt
tatgtttgtttctgtgggaagagacctgacccaccttcagatttttatttgacacctcat
tcttgtggagaaccctgtggaaaccagcttgagaaagaggctggtgatgagggtaagggt
gatctttgccctcatgtttgtgtgttacagtgccatccaggtccctgccctccttgtaaa
gcatttgcacctccgcgcatttgtccctgtgggaagaaagtaattacaacaagatgctcg
gaccgaaagtctgttctcacttgtggtcggcattgcgataagcttcttgactgccagcgt
caccgttgtgaaaatatttgccatcttggtccatgtgatccttgtcttgtcttaatcaac
gcctcttgtttttgcaagagaaaggttgaggttgttctatgtggagaaatggctgtgaaa
ggcgaagttaaagctgaagatggtgttttttcctgtaatttaatttgtggaaagacgctg
agttgtggaaatcatgattgtgtcgaaacatgccaccctggcctttgtggagactgtgat
ttgatgcctggcagggttaagtcgtgctgttgtggaaagacgagcttgcaggaggaacgc
caaagttgtttggacccaattcctacttgttcacagaaatgtggtaaggcccttccttgt
gggatgcatcactgtgaggaggtatgccatgctggggattgtccaccctgtatggttctt
gtcacacaaaactgtcgatgtggatcaacatctaggaatngtgaatgccatataacaacc
atggaaaatgataaatttgtctgtgagagatcttgcgggcagaagaagagctgtgggagg
cacaggtgtagtgagaggtgctgcccttgttcaaattcttacaatcattattctggggat
tgggatccacacttttgccagatggcatgcggcaagaagctaagatgtggacagcatttt
tgtgaatcattatgtcacagtggccattgtccaccttgtcttgaaactatcttcactgat
ctgacttgtgcgtgtgggagaacttcaatccctcctccgctgccgtgtgggacgcctccg
ccatcctgtcaacttccatgctcagttcctcaaccctgtggccacccgtcttctcacagc
tgccactttggagactgccctccttgctcagtgcctgtagcaaaagaatgcattggtgga
catgttgttcttagaaacattccttgtgggtcaaaggatatccgatgtaacaagctctgt
ggaaagaccaggaggtgtggtctccatgcatgtaacaggacttgtcacccagtgccatgt
gactctccctgtggacctgaaacactgtcaaaggcttcttgtgggcagacatgcggtgct
cctaggagagattgcaggcacacatgtaccacaccttgtcatccgtcagcttcttgccct
gacgtgaggtgtgagtttctggttactatcacatgtggttgtggtcggttaacagtaaca
gttccttgtgatgctggaggtagcagtagtggtttcagtgctgataccattcacgaagcc
tccattgtccaaaagctgccagtaccactacaaccagtggaattaaatgggaagaaggtt
ccacttggacagaggaagcttgtgtgtgatgatgaatgtgccaaattggagcgtaaaaag
gttcttgcagatgcctttgatattacacccgtcaacttggatgcacttcattttggtgag
aattccgttatgacagagttacttgtagacttgtataggcgtgatcccaagtgggtgcta
tctgtggaggaaagatgcaagtatttagtaatgggcaagagcagagggactacaagtggt
ctgaaggttcatgttttctgtccgatgctgaaggataagagagatgctgtgagacttata
gctgagaggtggaagcttgcaatttattctgctggttgggagcctaagcgtttcattgtg
gttcatgcgacacctaaatctaaggccccacaacgtgttataggtgttaagggtaccacc
actctgaatacgttccatctgccagtttttgatcatttggttgacatggatcctaggctt
gttgtttcttttgtagatctgccaagagaagcagatattagtgcattagtcctgaggttt
ggtggggagtgtgagctagtttgggtgaatgacaagaatgccttggctgtctttaatgat
cctgcccgagcagcaactgcaatgaggagattggatcatggatctgtctactatggggct
tcgatgatttctcaaagtgttggagcattggggggatcatccggtagtaatgcttgggga
ggagcagggtcaaccgaggaaggaggtgcccttgctgcattgaaaggcaacccatggaag
aaggctgtagttcaggatcctggtaggagagaagattcgtgggctgatgaagaatggtcc
agtggttctgcagtgcaggtttctgcttggaaggtgaacgaaactcctattgctgcctca
ataaacaggtggagtgcgttcgactctgaaacatcttcgaatccagctgctgcatctgtt
aaaattgaagatactacagaacgtgtggaaaatcaatccaagtcagggttggaatcgatt
gcaacttgttcgagttccgcagggcaacccaatgcagcagatgtcattgacaatgatctt
actgaagtagtggatgactgggagaaggcttatgaatga
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