Tripterygium wilfordii (thunder duke vine): 120016804
Help
Entry
120016804 CDS
T07256
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
twl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120016804
04120 Ubiquitin mediated proteolysis
120016804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120016804
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120016804
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
U-box type E3
120016804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
120016804
NCBI-ProteinID:
XP_038725654
LinkDB
All DBs
Position
15:complement(11742975..11751533)
Genome browser
AA seq
1036 aa
AA seq
DB search
MATQRPQRSPEEVEDIILRKILLVSLTDTGDINDSRIVYLEMTAAEILSEGWELRLSRDL
MERILIDRLSGQFPVVEPPFDYLLGCYKRAHEESKKIVSMKDKNLRSEMENVIKQLKKLC
VSYCRIHLGNPELFSSGNLSGKRNASPLLPLIYAAVDGFGSGGGVQCPPGFLEEFFRDAD
FDTLDPILKGLYEDLRENVVKVTALGNFQRPLRALQFLVSFPVGAKSLVSHPWWIPKGVY
LNGRVIEMTSILGAFFHVSALPDHTLFKSQPDVGQQCFSESSTRRPADLLSAFTTIKTVM
KNLHDGLAEVLLTLLKNTDTRENVLEYLAEVINKNSSRAQIQVDPISCASSGMFVNLSVI
MLRLCEPFLDANFTKKDKIDPMYVFDHSRLDLRGLTALHASSEEVAQWINSENPGAGDGS
DQSVEGDRRLLRSQEATSSGSSIGGVSPQNTNPVSSSVQRTKYPFICECFFMTARVLNLG
LLKAFSDFKHLVQDISRCEDALSTLKAMQGQAASPQMNLDIARLEKELEMYSQEKLCYEA
QILRDGTLIQDALSFYRLMLVWLVGLVGGFKMPLPSTCPMEFASMPEHFVENAMELLIFA
SRIPKALDGILLDEFMNFIIMFMASPEFIRNPYLRAKMVEVLNCWMPRQSGSSATASLFE
GHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA
KQEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRL
FHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKS
LTLKDPEKYEFRPKQLLKQIVYIYVHLAKGDTENCFPAAISRDGRSYNDQLFSAAADVLR
RIGEDGRVIQAFIDLGAKAKLAASEAMDAEAALGEVPDEFLDPIQYTLMKDPVILPSSRI
TIDRPVIQRHLLSDSSDPFNRSHLTADMLIPDTELKAKIEEFVKFQASKRHGETISIHSN
TKGTIQTTHGGDMLID
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcagagacctcaaaggtcaccggaggaggtggaggacataatcctccgcaaa
atcctccttgtgtcgctcactgataccggagacataaacgattctcgaatcgtctacttg
gagatgaccgcggccgagattctcagcgagggctgggaattgaggctctcgcgcgacctc
atggagcgtatccttatcgatcgcctctccggccagtttccagtcgtggagcctccattt
gattacttacttggctgctacaaacgcgcgcacgaggagtcgaagaagatcgtgtcgatg
aaggacaagaatttgcggtcggagatggagaacgtgattaagcagctgaagaagctctgt
gtttcgtattgtagaatccacttagggaaccccgagctgttctctagcggaaacctgagt
ggtaagcgcaacgcttcgcctctcttgccgctgatttatgcggctgtggatgggtttggt
agtggtggcggggtccagtgcccgcctgggtttttggaggagttcttcagagatgcagat
ttcgatacacttgacccaatactgaagggactgtatgaggatttgagggaaaacgtggtt
aaagtgacggctttggggaattttcagcggccattacgagcattgcaattcttagttagc
tttcctgttggagcaaagtctctggtcagtcatccatggtggataccgaaaggggtttac
ttgaatggtcgtgtcatcgaaatgaccagcattttaggggcctttttccacgttagtgcc
ctacctgatcatacgttattcaagagccagccagatgttggccagcaatgcttctctgaa
tcatcaactcgtcgaccagctgacttgttatctgcatttaccacaatcaagactgtcatg
aagaacttacatgatggtttagcagaagtcctacttacgcttctcaaaaatactgatacc
cgtgagaatgttctcgagtatcttgcagaggtgatcaataaaaattcatcaagggcccag
atacaggttgatcctatatcttgtgcgagttcaggcatgtttgtcaatctcagtgttatc
atgcttcggctctgtgagccattcttagatgcaaattttacaaaaaaggacaaaattgat
cctatgtatgtatttgaccatagccgcttggatttaagggggctgactgctttacacgca
tcatcagaagaagttgctcaatggattaatagcgaaaatcctggggcaggtgatggctcc
gatcagtctgttgaaggtgacagacgcttgctgcgctctcaagaagccactagttccgga
agcagcattggtggagtttctccccaaaataccaaccctgtatcaagtagtgtacagaga
actaaatacccatttatttgtgaatgcttctttatgactgcgagggtgcttaacttgggc
ctgttgaaagcgttttccgactttaagcatttagttcaggacatttcaagatgtgaagat
gccctctccactttaaaagccatgcaagggcaagcagcttctccacaaatgaatttggat
attgctcgacttgagaaagagttggagatgtattcacaggaaaagctttgttatgaagct
cagatactgagagatggaacacttattcaggatgcactctctttctatcggctgatgttg
gtttggttggtgggcctagttggtggatttaaaatgcctctgccttctacttgccctatg
gaatttgcatccatgcctgagcactttgtggaaaatgcgatggagctgcttatatttgct
tctcgaattcctaaagctttggatggaattttgctggatgaatttatgaacttcattata
atgttcatggcaagtccagaatttatcagaaacccttatctaagggcaaagatggttgaa
gtattgaattgctggatgccccgtcaaagtgggtcatctgcgacagcttctctgtttgaa
ggtcatcaattgtctcttgagtatcttgtgaggaatcttttgaagctttatgttgacatt
gagttcacaggttctcatactcagttctatgacaagtttaacatccgacataatattgcg
gagctgctagagtacctgtggcaggtccctagtcaccgtaatgcttggagacagattgct
aagcaagaggagaagggcgtctatttgaatttcctaaacttcctgatcaacgatagcata
tatctacttgacgagagtcttaacaagattcttgagcttaaagagctagaagctgaaatg
tctaacactgcagaatgggagcgaagaccagctcaagagaggcaggagaggacccgccta
ttccactctcaagaaaatattattcggattgacatgaagttagcaaatgaagatgtcagt
atgctggcattcacatcagagcagattactgctcctttcctactacctgagatggtagag
agagtggccagcatgctcaattactttctgttacagcttgtgggtcctcaaagaaaatca
cttactcttaaagacccagaaaaatacgaattccgtccaaaacagctgcttaagcagatt
gtctacatatatgttcatctggcaaagggtgataccgaaaattgtttcccagctgccatc
tctagagatggccgttcttacaatgaccagttgttcagtgctgcggcagatgtccttagg
agaattggcgaagatgggagggttatacaagcatttattgacctaggtgcaaaagccaaa
cttgcagcttctgaggcaatggatgctgaagctgctcttggagaggtacctgatgaattc
cttgatcctattcagtacacgttgatgaaggatccagtgatcttaccttcttcaaggatc
actatagaccggcctgtcattcaaaggcatcttctcagtgatagttctgatccattcaac
cgatcccatctcaccgcggacatgctgattccagacacagagttgaaggcgaaaatagag
gaattcgttaagttccaagcatcgaagaggcacggcgaaaccataagcattcatagtaac
actaaaggaacaattcaaaccacacatggaggagacatgttaattgattag
DBGET
integrated database retrieval system
