Tripterygium wilfordii (thunder duke vine): 120016867
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Entry
120016867 CDS
T07256
Name
(RefSeq) protein PIR isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120016867
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120016867
Factors involved in mRNA localization
Other mRNA localization factors
120016867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
120016867
NCBI-ProteinID:
XP_038725747
LinkDB
All DBs
Position
15:complement(5054710..5076298)
Genome browser
AA seq
1286 aa
AA seq
DB search
MAVSIEEAIASLSTFSLEDEQPEMQGSGVLVTAESGATNSPIEYTDVAAYRLSLSEDAKA
LNQLNTLIQEGKEMASVLYAYRSCVKALPQLPDSMKHSQSDLYLETYQVLDLEMSRLRDI
QRWQASAASRLAADMQRFSRPERRINGPTITHLWSMLRLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDIDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLVNIFKNDPVI
PAFPDLHLSPAAILKELSIYFQKFSAQTRLLSLPAPHELAPREAQDYQRHYLIASHIGAI
RAEHDDFTIRFASSLNQLLLLKSTDGADVEWCKEIKGNMYDMVVEGFQVLSRWTARIWEQ
CAWKFSRPCKDAVPELHETAAAFSDYEKVVRYNYNAEERKALVELVSYVKSIGSMMQRYD
TLVAEALWETIHAEVQDFVQNTLATMLKTTFRKKKDLSRILSDMRTLSADWMANTSKPES
ELQSLPHVGEESRGNLFYPRPVAPTAAQIHCLQFLIYEVVSGGNLRKPGGLFGNSGSEIP
VNDLKQLEIFFYKLGFFLHILDYSVTIATLTDLGFLWFREFYLESSRVIQFPIECSLPWM
LVDYVLESRNAGLLESVLIPFDIYNDSAQHALVVLRQRFLYDEIEAEVDHCFDILVSKLC
DISFTYYKSWASSELLDPSFLFALDNGENYAVQPMRFAALFQMTRVKLLGRTINLRSLIA
ERMNKAFRENLEFLYDRFESQDLCAIVELEKLVDILKHAHELLSRDLSIDSFSLMLNEMQ
ENISLVSFSSRLASQIWSEMQRDFLPNFMLCNTTQRFIRSSKVPPIPVQKPSVPHAKPNF
YCGTQDLNSAHQSFAQLHSGFFGMPHMFSVVRLLGPRSLPWLIRALLDHISNKITMIEPM
ITGLQEALRKSVGLLPFDAGVSGCMRLVKEHLNWGTKSELKAEVLRGIKEIGSVLYWMGL
LDIVLREVDTMHFMQTAPWLGLYSGADGQISDFQDGGDSPLVNLFKSATAAVVSNPGCRN
PASFHTMSKQAEAADLLYKANMNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTS
KDFYRIYSGLQIGYLEDSVHASLNSHETLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVL
NIAEIEGTSNTQTQKNSNLVQGWEALLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQ
SGAPLHRIKFENTVSAFETLPQKGAS
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctcgatcgaagaagccattgcttctctatctacattctcgctcgaggatgag
caaccggaaatgcaaggatcgggggttttggtaactgctgaaagtggcgctactaatagt
ccaatagagtatactgatgtagctgcataccgattatctctatccgaagatgcaaaggct
ctcaatcaactgaacacccttatccaagaaggcaaggagatggcgtcagtcctgtatgca
tatcgcagttgtgtcaaagctcttcctcagcttcctgattcaatgaagcacagtcaatct
gatttgtaccttgaaacataccaagtcctggacttagagatgagtcgattgcgtgatatt
cagagatggcaagcctcagccgcatctaggctagctgctgatatgcaacgattttctagg
cctgagcggcgcattaatggcccgacaataactcatctctggtccatgttgaggttactt
gatgtccttgtgcaacttgatcatcttaaaaatgccaaagcaagcatacccaatgacttc
tcgtggtacaagaggacatttacacaagtcagtgctcagtggcaagacattgattcaatg
agggaggaattagatgatctgcagattttcttgagcactaggtgggctatcttgttgaac
ctgcacgttgagatgttccgtgtgaacaacgtagaagacattcttcaagttcttatagtc
tttgctgttgagtcgttggagttggattttgcccttctatttccagagcgccacattctt
ctacgtgttttgcctgttcttgtagtcttagcaacatcatcagaaaaagatagcgagtca
ctatacaagagggttaaaatcaacagactggtcaatattttcaagaatgatcctgttatt
cctgcattcccggatctccatctttctcccgctgcaatcttgaaagaattgtcaatttac
ttccaaaaattctctgcacaaactcgtcttctcagccttccagcacctcacgagcttgca
ccgcgggaggcacaagactatcagagacattatctgattgccagtcacattggagccatc
cgagctgagcatgacgatttcacaatacggtttgcttcatccttgaatcagttattactg
ttgaagtccacagatggtgcagatgttgaatggtgcaaagaaatcaagggaaatatgtat
gatatggtggttgaaggtttccaggtcttaagcagatggactgcgcggatctgggaacaa
tgtgcatggaaattctcgcgcccctgcaaagatgctgttcctgaattacatgaaactgca
gcagcattttctgattatgaaaaggtggtacgctacaattataatgcagaggaaaggaaa
gcattggttgaacttgtgagctatgtaaagagcattggatcaatgatgcagcgttatgac
acattggtagctgaggctctatgggaaactatacatgctgaggtacaagattttgtccag
aacacattagccactatgttgaagactaccttcaggaagaagaaggacctatcaaggatt
ctttctgatatgcggaccctttcagcagactggatggcaaacacaagcaagcctgaatct
gagttacaatctttaccacatgtaggagaagaaagcagaggaaacttattttatcctagg
cctgttgccccaaccgctgcacagatccactgcttgcagttcctgatatatgaagtggtg
tccggcggtaatcttaggaagcctggaggactttttggcaatagcggctcagagattcct
gttaatgatctaaagcagttggaaatcttcttttacaagcttggcttcttcctgcatata
ctggactattcagtgacaattgcaactttgacagatcttggcttcttatggtttcgagaa
ttttatttggagtcttctcgtgttattcagtttcctatagaatgctcccttccctggatg
ctggtggattatgtgcttgagtcacgaaatgcaggtcttcttgaaagtgttctgattcca
tttgacatctataatgattcggctcaacatgcattggttgtacttaggcagcgttttctc
tatgatgaaattgaggctgaggtggaccactgttttgatatattggtttccaaactgtgt
gacattagtttcacatattacaagagctgggcatcaagtgagctactggatccgtcattc
ctctttgccttggacaatggagaaaattatgctgtccaaccaatgagatttgctgctctc
ttccagatgacaagggtgaagttacttgggaggactatcaatttaaggagtttgattgct
gaacgaatgaacaaagccttcagagagaatcttgagttcttgtatgatcgttttgagtct
caagatctatgtgccatagtggaattagagaagctggttgatattttaaagcatgcccat
gaattactgtcaagagatctatcaatagactccttcagtctaatgctgaatgagatgcaa
gagaacatatcgcttgtgtcattttctagtcgacttgcttctcagatttggtcagagatg
caacgtgactttttgcccaacttcatgctttgcaacacaacccaacgttttatacgatca
tcaaaagttcctcccatacctgttcaaaagccatcagttccccatgcaaagcccaacttc
tattgtggtactcaagatctgaattctgcacaccaaagttttgcgcagttgcatagtggg
ttctttggaatgcctcacatgttttctgttgttagacttctgggacccagatcactaccc
tggctcatccgggcactgcttgatcatatatcaaacaagataactatgattgaaccaatg
attacggggttgcaagaggcactgcgaaaatctgttggattgcttccttttgatgctggt
gtctcaggttgtatgaggcttgtaaaagaacatttaaactggggaacaaaatcagagctt
aaagcagaggttcttcgtggcataaaagagattggaagtgtgttatattggatggggctt
cttgatattgtgttgagagaagtggacaccatgcatttcatgcaaacagccccatggcta
ggtttgtactctggtgcggatgggcaaatttcagattttcaagatggtggggatagcccc
cttgttaacctttttaaatcagcaactgcagcagttgtatcgaaccctggatgtcgaaat
ccagcatcgttccacacaatgtcgaaacaggctgaggcagcagatcttttgtacaaggcc
aacatgaatacaggaagtgtgcttgaatatgcccttgcgtttacaagtgcggcactggat
aaatattgtagtaaatggagtgctgctcccaagacggggttcattgacattactacttca
aaagatttctaccgcatctacagtgggctccaaattggatatctggaagattctgttcac
gcatcattgaatagccatgagacgctgggtgattcagttgcttggggtggttgtaccata
atatacttgcttggacaacagctacattttgagctctttgatttttcctatcaagtcctc
aatattgcagaaatcgagggtacatcaaacacgcaaacacaaaagaatagtaatctcgtc
cagggatgggaagccttactagaagcaatgaagaaagcaagacggttgaacaatcatgtg
ttctcgatgctgaaagcacgatgccccctcgaggacaagactgcttgtgccatcaaacaa
agtggtgcccctctgcatcgaattaaatttgagaacactgtttctgcatttgaaacattg
ccacaaaaaggtgcctcatga
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