Tripterygium wilfordii (thunder duke vine): 120016976
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Entry
120016976 CDS
T07256
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120016976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120016976
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120016976
mRNA degradation factors
5'-3' decay
Decapping complex
120016976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
120016976
NCBI-ProteinID:
XP_038725926
LinkDB
All DBs
Position
15:complement(12385531..12392676)
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AA seq
808 aa
AA seq
DB search
MARSDSKVMTDVTESSSDALFDASQYAFFGKNTVEEVDLGGLDNDADDPVFGSVNDDEYH
LFNKDEGVCIGSLADVDDLATTFAKLNRVVTGPRNPGVIGDRGSGSFSRESSTATDWAQD
GEVVSWLDQQMPCLEDALELKRWSSQPQPSFAHFSESKPLYRTSSYPEQPPQLHRYSSEP
VLALKSNFTSFPPPGSRSQQASPQHVNISSLSGVSGSPFSAPNFSPLSNSNPHLSGLHHG
LDYGGNVPQYSSPGLLLNSRAQSHWLNNSGLLHGDQSSVLHNISQQQLSRNNALFSSHLF
SLQQQQQQQQRLHASLQPSLAHLAAMQSQLYHSHSAPSQRMMVGLTDRVQKPKSSHRGRH
RSSLHGSDISSQKSDSALVQFRSKYMMAEEIESILRMQHAATHSNDAYIDDYYHQARLAK
KSAGSRIKHHFAPAHLKELPSRGRNSAEHNPHADALGRIPLTSIRRPRALLEVDPPPSGC
GAGSSEQAISEKSLEQEPMLAARITIEDGLCLLLDIDDIDRFLQFSQHQDGGAHQRRRRQ
VLLEGLAASLQLVDPLGKSGHTVGLDPKDDIVFLRLVSLPKGRKLITRFLQLLFPGSELT
RIVCMGIFRHLRFLFGGLPSDMGAAEKTNNLAKTVTACINGMDLRALGACLVAVVCSTEQ
PPLHPLGSPAGDGASVILKSLLDRATKLLSDPQAAGTFSLSNQALWQASFDEFFNILTKY
CANKYETILQSVYADNQSSAEAIGSEVTSAISDEMPVDLLRSSLPHTNESQRKLLLDFAQ
RSMPVSGFNNHSGTSGRINSESVFKASV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatctgatagcaaagttatgacggacgtcactgaaagctcatcagatgctctc
tttgatgcttcacagtatgcgttctttgggaaaaatactgtggaagaggttgatttggga
ggtctggataatgatgctgatgatcctgtatttggatccgtcaatgacgatgagtaccat
ttgttcaataaagatgagggtgtttgtattggatcattagcagatgtggatgatctggca
actacatttgcaaagttaaacagagttgtcacgggaccaagaaatcctggagttattgga
gatagaggttctggatctttttcaagagaaagttcaactgctactgactgggcacaagat
ggagaagttgttagctggttggatcagcaaatgccttgcctggaagatgctctggagctc
aagagatggtcatcacagccacaaccttcctttgctcatttcagtgaatcgaagcccctg
tacagaacttcctcatatccagagcagccaccacagctgcatcgctattcaagtgaacca
gttctggcattgaaatcaaattttacatctttccctcctcctggtagcagatcccagcaa
gcttcaccgcagcacgtgaatatttcttccctttccggagtatcagggtcacccttctct
gctccaaacttctccccattatccaactctaaccctcatctttctggtttacatcatggg
ttggactatggtggaaatgttccccagtacagctctcctggacttttgttaaacagcaga
gcacaaagccattggcttaacaacagtggcctattacatggagatcagtccagcgtcttg
cataatatatcgcaacagcaattgtctcgcaataatgccctattttcatctcatctattt
tcattgcagcaacagcaacagcaacagcagagactgcatgcttcacttcaaccatctttg
gcacatttggcagcaatgcaatcccaactatatcattctcattctgccccatcacaaaga
atgatggttggtttgactgaccgggttcaaaaaccgaaatcatctcatcgagggagacat
cggtcttctcttcatggctctgatattagtagtcagaagagtgatagtgcattggtgcaa
ttcaggtccaagtatatgatggccgaagagattgagagcattcttagaatgcagcatgct
gctactcatagcaatgacgcatatattgatgattattaccaccaagctcgccttgctaaa
aaatctgccgggtccaggataaagcaccatttcgccccagcccacctgaaggaactgccc
tctcggggccgcaacagtgctgaacataatcctcatgctgatgcacttgggaggattccc
ttgacttccattcgcaggcctcgtgctcttcttgaagttgaccctcctccctcaggttgt
ggtgctggaagttctgagcaagcaatctctgaaaagtccttggaacaggaaccaatgctt
gcagctagaattactattgaagatggcctttgcctacttctcgatatagatgacattgac
cggttcttgcaatttagccagcatcaagatggtggggcccatcaacggcgtcgacggcag
gtgctgctggaagggttggcagcatcacttcagcttgttgatccacttggcaaaagtggc
cacactgttggcctggaccccaaggatgatattgtgttcttgcgattagtctctctccca
aagggaagaaagctcattaccaggtttctgcagcttctctttcctggtagtgaactcacc
cgaattgtttgtatgggcattttccgtcacttaagatttttgtttggtggtcttccttcg
gatatgggagcagctgagaagactaataatttggcaaagacagttactgcatgtattaat
ggcatggatcttcgtgcacttggtgcttgtcttgtcgcagttgtttgttcaacagagcag
ccgccgttgcaccctcttggaagccctgccggggatggggcctctgttattttgaagtct
ctacttgaccgggcgactaagctgttatctgatcctcaggctgccggcacctttagcttg
tccaatcaggccctctggcaggcatcatttgacgaattttttaatatccttactaagtat
tgtgcgaataaatatgaaactattttgcaatcagtctatgctgacaaccagtcaagtgca
gaggctattggttcagaagtaactagtgcaataagtgatgaaatgcctgtggatcttctg
cgatcaagtctgccgcacacaaatgaaagccagcggaagcttctattagattttgctcag
agatccatgcctgttagcggattcaacaatcattctgggacaagtggccggataaactct
gaatcagtttttaaggcctcggtttaa
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