Tripterygium wilfordii (thunder duke vine): 120017217
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Entry
120017217 CDS
T07256
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120017217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120017217
03036 Chromosome and associated proteins [BR:
twl03036
]
120017217
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120017217
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120017217
PBAF complex
120017217
GBAF(ncBAF) complex
120017217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF7685
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
120017217
NCBI-ProteinID:
XP_038726295
LinkDB
All DBs
Position
15:complement(10934345..10940666)
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AA seq
750 aa
AA seq
DB search
MPGSPSDGRGKWKRRKREPQIARKPKHEEVDDEEDDNDESLDREDSEEPNQNLLSAAVAA
DLRPQEVEVLAEGGVRICDFPVVVRHTVSRPHSSVMAVVAAERANLVGDSVIRGQVAMEL
ESVSYGQLQAVSRVPAESIAAATTGGNDQERSDGGNLTPPYVITPPPILECGGIAKRFES
RVHVVPMHSDWFSPASIHRLERQVVPLFFSGKSPNHTPEKYMECRNFIVATYMENPEKML
TISDCQGYIVGVDNTDLRRIFRFLDHWGIINYCTAAPNCEPLNGGSYLREDPGGEIHVPS
DALKSIESLIKFDLPKCRLKATDVYSSMSGNVDDFSGLDDRIRERLSDYHCNSCSQPLPS
IYYQSHKEADVLLCSDCFHDGKFVIGHSSIDFVRTDSTKDYGDTDGENWRDQETLLLLEA
IEIYSENWNEIAEHVGTKSKSQCILHFLRLPMEDGKLENIEVPSMAKSSNASNIYDRRSL
HSTSNGSSPNDDDPESRLPFANSGNPVMSLVAFLASAVGPRVAAACAHASLVALAVDNST
AAAGNIVQRGGSVLDSRINLDGMHGREGSFYGDLANSIQQKEGNSAVHVSRVQNEAQFTP
ISAEKVEAAAKAGLAAAAVKAKLFADHEEREIQRLYASVVNQQLKRLELKLKQFAEVEAL
LTRELELVEKTRLRFAGERARILAARFGGAAATSQISMPGVSPPIVNNSIGSHRPQVVSA
SLSQPSISSYGNNQLVRPQMPFMPRLSMFL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgccaggttcaccttcagatggtcgcggcaaatggaagagacggaagcgggagccccaa
atcgcccggaagcccaagcacgaagaggtcgacgatgaggaggacgacaacgacgagtcc
ctcgaccgcgaggactctgaggaaccaaaccagaatctgctatccgctgctgtcgcggcc
gatctgaggccacaggaggtggaggtgctggccgagggtggggttcgcatttgtgatttc
cctgtagtggtgcggcacacggtaagccggcctcactcgtctgtgatggctgttgttgct
gcagagagggcgaatttggtaggggatagtgttatcagggggcaggtggcgatggagttg
gagagtgtgtcttacggacagcttcaggcggtgtctcgtgttcctgctgaaagcattgca
gctgccacgacgggtggtaacgatcaggagaggagtgatggtgggaatttgacgccgccg
tatgtgatcacgcctcctcctatcttggagtgcggcgggatagctaagcggtttgagagt
agggttcatgtagttcctatgcattcagattggttttcgccagcctcaatccatcgactt
gagagacaagtggtgccactttttttttctgggaagtcgccgaatcatacaccagagaag
tacatggagtgtaggaacttcattgttgctacatatatggaaaatccagagaagatgctt
acaatttctgattgccagggttatatagttggtgttgacaatacagatttacgtaggatt
tttcgatttcttgatcactggggaattatcaattactgcacagctgcaccgaattgtgag
cctttgaatggtggttcctatttgagggaggatccagggggtgagattcacgtcccgtca
gatgctttaaagtcaattgagagtttgatcaaatttgaccttccaaaatgtaggctcaag
gcaactgatgtttattcatccatgtctggtaatgttgatgatttctctggcttggatgac
agaattcgagagcgcttatcagattatcattgcaattcttgttcacaacctcttcccagc
atttactatcaatcacataaggaggctgatgtgcttctgtgttctgattgctttcatgac
gggaaatttgttattggtcactcgagcatagactttgtaaggacggattcaacaaaagat
tacggtgatacagatggggaaaattggagagatcaagagacactgctgctactcgaggcc
atcgaaatttacagtgagaattggaatgaaattgctgagcatgttggcaccaagtcaaaa
tcacaatgcatccttcattttcttcgactgcctatggaggatggaaagttggaaaacatt
gaagttccaagcatggctaagtcttccaatgcatcaaatatatatgatcgtagaagcttg
cattcaacttcaaatggatcatcccctaatgatgatgaccctgaaagcaggctacctttt
gcaaattctgggaatccagtaatgtccctggttgcctttttggcctctgctgttggacct
agagttgctgctgcctgtgcccatgcatccttggttgcattggcggtggataatagcact
gctgctgctgggaacattgtgcagaggggaggatcagtgcttgatagtaggattaatctg
gatggtatgcatggcagagaaggcagtttctatggtgatttggcgaattcaattcagcaa
aaagaagggaactctgcagtacatgtttctcgggtccaaaatgaggcacagttcactcct
atatctgcagagaaagttgaagctgctgccaaagctggtcttgctgctgcagccgttaag
gcaaaactctttgcagaccatgaagaacgagaaatccagaggctgtatgccagtgttgta
aatcaacagttaaagagattggagctgaagttgaagcaatttgctgaagttgaagccctg
ttaacgagagaattggaacttgtggagaaaacaaggctaaggtttgctggtgaacgggcc
cgcattttagcagctcgttttggaggtgctgcagccacttcacaaataagtatgcctggc
gtctctcctcccattgttaacaatagtattggcagccataggccacaagttgtgtcagca
tctttgtcacagccaagcatttcaagctatgggaacaaccaattggtccgtccacaaatg
ccatttatgccacgcctgtcgatgtttctgtaa
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