Thiothrix winogradskyi: L2Y54_01990
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Entry
L2Y54_01990 CDS
T08347
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn03420
Nucleotide excision repair
twn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L2Y54_01990 (uvrD)
03430 Mismatch repair
L2Y54_01990 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twn03400
]
L2Y54_01990 (uvrD)
Enzymes [BR:
twn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L2Y54_01990 (uvrD)
DNA repair and recombination proteins [BR:
twn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L2Y54_01990 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
L2Y54_01990 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AtzG-like
Motif
Other DBs
NCBI-ProteinID:
UJS24828
LinkDB
All DBs
Position
350482..352692
Genome browser
AA seq
736 aa
AA seq
DB search
MNTQSPILAPLNPQQQLAVAAPPKSVLVLAGAGSGKTRVLVHRIAWLIEVENVSPLSILA
VTFTNKAAAEMRGRIQDLLQLPSGGMWVGTFHGISHRLLRLHWQQAKLPQTFQILDSEDQ
IRMVKRILKSLELDETRFPPRQVAGFINARKDEGSRPHHIEDKGDFNQRQMVQIYSVYEQ
TCQRNGVVDFAELLLRSLELLRDNPDLQQHYRNRFRHILVDEFQDTNALQYAWLRLLAGD
KNPVFAVGDDDQSIYGWRGAKIENIRNFTKHFPDCETVRLEQNYRSTANILKAANALIDN
NKGRLGKNLWTDGKDGERLHLYAAFNEIDEARFVAGRIQKWVDQGGMRRDVAILYRSNAQ
SRVFESTFNENRIPYRVYGGLRFFERAEIKDALAYLRLTVNHQDDASFERIVNHPPRGIG
ERTVDILRSHARATNLSLWEAAAQAADIGDFTPRASNGVLGFVQLIKRMASDIHSLPLRE
QVEIVIDLAGLKPHFLAKEKGEAGQGRVDNLNELVTAAQGYTYVQSEETPDMSELSAFLS
HAALEAGEGQGEAGEDCVQMMTLHSAKGLEFPLVFLCGLEEGLFPHQMSADDPARLEEER
RLCYVGITRAEKELVMSYAEQRMLHGRTQFNPPSRFLRELPPELVEEVRPKVKTYSTGFG
GNNQFRAPANAPKPVTRTTNFNETGYRVGQRVRHAKFGDGVITDSEGAGAHSRVQVNFKA
VGVKWLVLGYANLEKI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccaatcccccattctcgcccccctaaacccgcagcaacaactcgccgttgcc
gcgccgcccaaatccgtcctcgtccttgcaggcgcaggcagcggtaaaacccgcgtgcta
gtccaccgcattgcctggttaatcgaagtcgaaaacgtctcaccattaagcatccttgcc
gtgaccttcaccaacaaagcggcggcagaaatgcgcgggcgcatccaagacctgctgcaa
ctgcccagcggcggcatgtgggtcggcactttccacggcatttcacaccgtttgctccgc
ctgcactggcagcaagcgaaattgccgcaaaccttccaaattctcgattccgaagaccaa
attcgcatggtcaagcgcatcctcaaatcgttggaactcgacgaaacccgtttcccgccg
cgtcaggtcgccggttttatcaatgcgcgtaaggacgaaggttcgcgcccgcaccacatt
gaagacaaaggcgatttcaaccagcggcaaatggtgcaaatttacagcgtgtacgaacaa
acctgtcagcgtaacggcgtggtcgatttcgccgaactattgctgcgctcgctggaattg
ctgcgcgataaccccgatttgcaacaacattaccgtaaccgtttccgccacattttggtg
gacgaattccaagacaccaacgcgctgcaatacgcttggttgcgcctgttggcgggggat
aaaaatccagtatttgcagtgggcgatgacgaccagtcgatttacggttggcgcggcgcg
aagatcgaaaacatccgcaatttcaccaaacacttccccgattgcgaaaccgtgcggctg
gaacaaaactaccgctccaccgcgaatatcctcaaagccgccaatgcattgattgataat
aacaaaggacgtttgggcaaaaacttgtggacggatggtaaggacggcgaacgcctgcac
ctctacgccgccttcaacgaaatcgacgaagcgcggtttgttgccggacgcatccaaaaa
tgggtggatcagggcggaatgcgccgcgacgttgctattttgtaccgttccaacgcgcaa
tcgcgggtatttgaaagcacgttcaacgaaaaccgcattccctaccgcgtctacggcggc
ttacgcttctttgaacgcgccgaaatcaaggacgcgctggcgtatttacgcctcaccgtc
aaccaccaagacgatgcctcgtttgaacgtatcgtcaatcacccaccacgcggcattggc
gaacgcaccgtcgacatcctgcgcagccacgcccgcgccaccaacctgtccttgtgggaa
gccgccgcgcaagccgctgacattggcgacttcaccccgcgtgccagcaatggcgtactc
ggtttcgtgcaactgatcaaacgcatggcaagcgacattcacagcctgcccttgcgcgaa
caagtcgaaatcgtcatcgaccttgccggactcaaaccgcatttcctcgccaaagaaaaa
ggcgaagcggggcaagggcgcgtcgacaacctcaacgaattagttaccgccgcacagggt
tacacctacgtgcaatccgaagaaaccccggatatgagcgaactttccgccttcctctcc
cacgcagcgttggaagcgggtgaaggtcagggcgaagccggtgaagattgcgtgcaaatg
atgacgctgcactctgccaaagggctggaatttccgctggtatttttgtgcggcttggaa
gaaggcttgttcccgcatcaaatgtccgccgatgacccagcacggttggaagaagaacgc
cgcctgtgctacgtcggcattacccgtgcggaaaaagagctggtgatgagttacgccgaa
cagcgcatgttgcacgggcgtacccaattcaacccgccgtcacgtttcctgcgcgaatta
ccgccggaattggtggaagaagtgcgcccgaaagtgaaaacctattccaccggctttggc
ggcaataaccaattccgcgcccctgccaatgcccccaaacccgtgacgcgcaccaccaat
ttcaatgaaaccggctatcgcgtcgggcagcgggtgcgtcatgccaagtttggcgatggc
gtgatcaccgattccgaaggcgcgggcgcacattcgcgggtgcaagtgaatttcaaagcg
gtgggcgtcaaatggctggtgttgggttacgccaatttggaaaaaatatga
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