Thiothrix winogradskyi: L2Y54_02290
Help
Entry
L2Y54_02290 CDS
T08347
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn03030
DNA replication
twn03410
Base excision repair
twn03420
Nucleotide excision repair
twn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L2Y54_02290 (polA)
03410 Base excision repair
L2Y54_02290 (polA)
03420 Nucleotide excision repair
L2Y54_02290 (polA)
03440 Homologous recombination
L2Y54_02290 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twn03032
]
L2Y54_02290 (polA)
03400 DNA repair and recombination proteins [BR:
twn03400
]
L2Y54_02290 (polA)
Enzymes [BR:
twn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L2Y54_02290 (polA)
DNA replication proteins [BR:
twn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L2Y54_02290 (polA)
DNA repair and recombination proteins [BR:
twn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L2Y54_02290 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L2Y54_02290 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UJS26579
LinkDB
All DBs
Position
complement(402369..405128)
Genome browser
AA seq
919 aa
AA seq
DB search
MTYTSAKPLVLVDGSSYLFRAFHALPPLTNAHGEPTGAMHGVLNMLDKLRKDYDPEHMAV
IFDAPGKTFRDDLYPQYKANRPPMPDDLRCQIEPLLTIIRAQGYPLLIIPDVEADDVIGT
LAAQYDGKVIISTGDKDMAQLVDERVHLINTMSGHYADPAGVVEKFGVAPERIRDYLALI
GDTVDNVPGVNKVGPKTAVKWLEEYGSLENIMARAAEFKGKIGENLREALAHLPLSFELV
TIKCDVELDLQPETLAFDPPDVETLRAMYERYGFRTRLAALAATPHPNLPPQGGKEQEGA
TGDLFAPCPPCGGRVGDGGYSSILTQPDLDAWLIRLQAAAEFAFDTETTSLDYMEAQIVG
VSFAITAGEAAYLPLAHDYLGAPPQLNRESVLAQLKPLLENPAIRKIGQNLKYDRSVLLN
HGITLRGIAHDTMLQSYVLDSTASRHDFDTLCAKYLNHTTISFADIAGKGKNQLTFNQVG
LEQATPYAAEDADYTLRLHQHFWAQLQALDGQRKLYESVEVPLVSVLSTIERNGVKVDAA
MLARHSQELETRMHSVMLEAYAAAGQEFNLASPKQLGEILYTKLGLTAPRKTPKGQPSTA
EDVLEELADMGHELPKLILVHRGLAKLKSTYTDKLPQQINPRTGRVHTSYHQAVASTGRL
SSSDPNLQNIPIRNEEGRRIRQAFIAESGCQLLAADYSQIELRIMAHLSRDAGLLNAFAQ
GLDVHRATAAEVFGTPLAEVTTEQRRAAKAINFGLIYGMSAFGLAKQLGVDRRDAQDYVN
LYFARYPGVKQYMDDTREQARAQGYVETLFGRRLFLPDIHSKNAATRQYAERTAINAPMQ
GTAADIIKKAMLAVDAWLQGSGLRTKMIMQVHDELVFEVPENEMATVREQVVALMTNAAV
LAVPLLVESGMGNNWDEAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgacgtataccagtgccaaaccgctcgtcctcgtggacggttcctcctacctgttccgc
gctttccacgcgctccccccgctgaccaatgcacacggcgaacccaccggcgcaatgcac
ggcgtgttgaatatgctggataaattgcgcaaggattacgaccccgaacacatggcggtg
attttcgacgcacccggcaaaaccttccgcgatgacctttacccgcaatacaaagccaac
cgcccgccgatgccggacgatttgcgctgccagattgaacccttgctgacgattattcgg
gcgcaaggctacccgctgctgattattcctgacgtggaagccgacgacgtaatcggcacg
ttagcggcgcaatacgacggtaaagtgattatttccactggcgacaaagacatggcgcaa
ttggtggatgagcgcgtccacctgatcaataccatgagcgggcattacgccgaccccgct
ggcgtggtggaaaaattcggggttgcgccagaacgcatccgcgattacctcgcgctgatt
ggcgataccgtggataacgtccccggtgtcaacaaagttggccccaaaacagcagtcaaa
tggctggaggaatacggttcgctggaaaacattatggcgcgagccgccgagttcaaaggc
aaaatcggcgaaaatctgcgcgaagccttggcacatttgccgctgtctttcgagctggtc
acgattaagtgcgatgtggagctggatttgcagccggaaacgctggcgtttgatccgccg
gacgtggaaaccttgcgggcgatgtatgagcggtatgggtttcggacaagattggcagct
ctcgccgctaccccccatcctaaccttcccccgcaaggggggaaggaacaagagggcgcg
accggcgatctcttcgctccctgccccccttgcgggggaagggttggggatggggggtat
tcttcaatcctcacacaacccgacctagacgcttggctaatccgcctacaagccgccgct
gaattcgctttcgacaccgaaaccaccagcctcgattacatggaagcgcaaatcgtcggc
gtgtctttcgccatcacagcgggcgaagcggcttacctgccattagcgcacgattacctc
ggcgcaccgccgcaactcaatcgcgaatccgtgctggcgcaactcaagcccttgctggaa
aaccccgctattcgcaaaattgggcaaaatctcaaatacgaccgcagtgtattgctgaat
cacgggattaccttgcgtggtattgcgcacgacaccatgttgcaatcgtatgtgctggat
tccactgccagccgccacgatttcgacacgctgtgtgccaagtaccttaaccacactacc
atcagttttgcggacattgcggggaagggcaaaaaccaactgacgtttaatcaagtcggg
ttggaacaagccaccccttatgcggcggaagatgccgattacaccttgcgcctgcatcaa
catttctgggcgcaactgcaagccctcgacgggcagcgcaagctgtatgaaagcgtggaa
gtgccgctagtgagcgtgctgtcgacgattgaacgcaatggggtgaaagtcgacgcggcg
atgttggcgcgtcacagccaagaactcgaaacgcggatgcattccgtgatgttggaggct
tacgcggcggcggggcaggaatttaaccttgcctcacccaagcaattgggggaaattctt
tacaccaagctcggtttgaccgcgccgcgcaaaacccccaagggtcagccgtctaccgct
gaagatgtgttggaagaactcgcggacatggggcatgaattgcctaagctgattttggtg
catcgcggtttggcgaaactcaaatccacttacaccgacaaattgccgcagcaaattaac
ccgcgtaccgggcgggtgcatacctcttaccatcaggcggtggcttcgacggggcggttg
tcgtcgtcagacccgaatttgcagaatatcccgatccgcaatgaggaagggcggcgcatt
cgccaagcgtttatcgcggaaagcggctgtcaattgctggcggcggactattcccagatc
gaattgcgcattatggcgcatttgtcccgtgatgccggtttgttgaatgcgtttgcgcaa
gggctggatgtgcatcgcgccacggctgctgaagttttcggtacaccgttggcggaagtg
accacggaacaacgtcgggcggcgaaagcaattaacttcgggctgatttacgggatgtcg
gcatttggtttggcaaaacagttgggggtggatcggcgcgatgcgcaagattacgttaat
ctgtatttcgcccgttaccccggcgtgaaacagtacatggatgacacccgcgaacaggca
cgcgcccaaggttatgtggaaacgctgttcgggcggcgtttgttcctgccggatattcat
tcaaaaaatgccgctacccgccagtatgccgaacgcactgcgattaatgcgccgatgcaa
ggcacggcggcagatattattaaaaaggcgatgctggcggtggatgcatggctgcaaggc
agcggcttgcgcaccaaaatgattatgcaagtgcacgatgaactggtgtttgaagtgccg
gaaaacgagatggcaacggtgcgcgaacaggtggttgcgctaatgacgaatgccgcagtg
ttagcagtgccattgttagtggagagtgggatggggaataattgggatgaggcacattaa
DBGET
integrated database retrieval system
