KEGG   Thiothrix winogradskyi: L2Y54_02300
Entry
L2Y54_02300       CDS       T08347                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
twn  Thiothrix winogradskyi
Pathway
twn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:twn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L2Y54_02300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:twn02022]
    L2Y54_02300
Two-component system [BR:twn02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   L2Y54_02300
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_50 FleQ AAA_3 AAA AAA_7 AAA_16 AAA_22 AAA_2 Herpes_BLRF2 bpMoxR
Other DBs
NCBI-ProteinID: UJS24886
UniProt: A0ABY3SZF5
LinkDB
Position
complement(405560..406915)
AA seq 451 aa
MIAPNVLLVDDEKTVRDATAQSLLLAGYEVQTFSRAADALPLITAEFEGVIISDIRMPEM
DGLEFLQHVLRIDRDLPVILISGHADVATAVSAIRNGGYDLLEKPFSNTQLVEVLKRASD
KRRLTLENRALKEALANQTRPGPRIIGQTPAIMLLRKMITRIANVNADVLVMGETGTGKE
LVARSIHEQSQRRDHNYVAINCAAIPASLLDSELFGHEAGAFTGAKGKRIGKFEHANGGT
LFLDEIEGMPLTTQAPLLRVLQERQIERLGSNKLIPLDIRVIAATKVDLKDAAERAEFRR
DLYYRLNVVTLEITPLRARREDIPLLFQHFVLIAAARCETEVPPLNSRALHVLMGHDWPG
NIRELRNIAERYVLLGEAYNFDLATLMNAGDRLEGLSLTEQVACFEKTLIAQALNHHQGN
TRAVMEALDVPRKTLTDKMKKYGLEREQFRE
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgattgccccgaatgttctgttggttgatgatgaaaaaacagtccgcgatgccacggcg
caatcgctgctgctggcggggtacgaagtgcaaacctttagccgtgccgctgacgctttg
ccattaatcacggcggaattcgagggcgtgattatttccgacatccgaatgccggaaatg
gatggcttggaatttctgcaacacgtcttgcgcatcgaccgcgacttgccggtgattttg
attagcggacacgcggatgtagcaacggcggttagcgcgattcgcaacggcggttacgat
ttgctggaaaaaccattttccaacacacaattggtggaagtgttgaaacgcgccagtgac
aagcgccgcctcaccttagaaaaccgcgccttgaaagaagctttggctaatcaaacccgc
cccggcccgcgcattattgggcaaaccccagcgattatgctgttgcgcaaaatgattacc
cgcattgcgaatgtgaatgccgatgtgttggtcatgggtgaaaccggcacgggcaaagag
ttggtggcgcgttccatccacgaacaaagccagcgtcgtgatcacaattacgtggcgatt
aactgcgcggctattcccgccagtttgttggacagtgaattattcgggcatgaagcgggc
gcattcaccggggcaaaaggcaaacgcattggcaagtttgaacacgccaatggcggcacg
ctgtttctggatgaaatcgaaggaatgccgctgaccacgcaagcgccgttattgcgggtg
ctgcaagaacgccagattgaacggctggggtcgaacaagctgattccgctggatattcgg
gtcatcgccgccaccaaagtcgatttgaaggatgctgccgaacgcgcggaatttcgccgc
gatttgtattaccgcttgaatgtggtgacgctggagattactccgctgcgagcgcgacgc
gaagacattccattgctgttccagcatttcgtgttgattgcggcggcgcgttgtgaaacc
gaagtgccaccgctgaatagtcgcgccttgcacgtattgatggggcatgactggccggga
aatatccgcgaattgcgcaatattgccgagcgttatgtgttattgggggaggcttacaac
tttgatctggcaaccttgatgaacgcgggtgatcggctagaagggctgtccttgaccgaa
caagtggcgtgtttcgagaaaaccttgattgcacaggcattaaaccaccatcagggcaat
acccgcgcggtgatggaggcattggatgtgccccgcaagaccctgaccgacaaaatgaaa
aagtacgggctagagcgcgaacagtttcgggaatag

DBGET integrated database retrieval system