Thiothrix winogradskyi: L2Y54_02400
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Entry
L2Y54_02400 CDS
T08347
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
twn
Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twn03032
]
L2Y54_02400
03400 DNA repair and recombination proteins [BR:
twn03400
]
L2Y54_02400
Enzymes [BR:
twn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L2Y54_02400
DNA replication proteins [BR:
twn03032
]
Prokaryotic type
DNA Topoisomerases
L2Y54_02400
DNA repair and recombination proteins [BR:
twn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L2Y54_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UJS24904
LinkDB
All DBs
Position
425018..427501
Genome browser
AA seq
827 aa
AA seq
DB search
MSENLVIVESPAKGKTIQKYLGNGFEVLASYGHVRDLIPKEGAVDPDNGYAMRYEIIDRN
QKHVDAIARALKKADNLYLATDPDREGEAISWHLYELLNERGALKGKNVQRVVFHEITKR
AVQEAIANPRDLAYDLVDAQQARRALDYLVGFNLSPLLWRKIKPSLSAGRVQSPALRLIV
EREDEIERFVRQEYWTMTAQNAKNGQAFNARLHTLDNHKLDQFDINNEARATEVRERLLQ
AANGKLLVSKVEKKQRKRYPAPPFTTSTLQQEAVRKLKFSTQRAMRVAQQLYEGIDLGSG
PVGLITYMRTDSVTLANEAIGELRGLIEQRYGQDKLPETPNFYKTKSKNAQEAHEAVRPT
SAYRTPEQVKSHLNEEQFKLYELIWKRTVACQMIYATLDTVSADLSAEAGSFFRASGSTI
RDAGFLLVYEEGLDDRASEKENPLPPLEEGESVTLHDIAAEQHFTEPPPRYSEASLVKAL
EEYGIGRPSTYASIISTLLAREYVELESRRFTPTDIGRIVIRFLTEHFTQYVDYDFTANL
ENELDEISRGEKAWVPVMDAFWQPFHTLVDEKMESVNRSDVLQSREIGIDPASGRPVSVR
LGRFGPMVQIGTKDDEEKPVFAGLRPGMKLDTVTLEEALELFKLPRQLGDTEDGKAISTN
VGRFGAYVKYGDQFASLKKEDDPHTITLERALELIAEKKIKDAEKILVDFGNGVQILKGR
WGPYINKVIKRVKVQARLPKDREPDSMTLEECEALIAVAAEAKSVKKGAKKAAATPATES
AEQPAADAPAKPAKAKAAPKKTATAKKPVAKKPAASKKTPSSKKSAS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacctagtaattgtcgaatctccagccaaggggaaaaccatccaaaagtac
ttgggtaacgggtttgaagtactggcctcttacgggcatgtacgtgacctgatccccaag
gaaggcgctgtcgaccccgacaacggctacgcgatgcgctatgaaatcatcgaccgcaac
caaaagcacgtcgatgcgattgcgcgggcgctcaaaaaagccgacaacctttacctcgcg
actgacccggatcgcgaaggcgaagccatctcttggcacttatacgaattattgaacgaa
cgcggcgcactcaagggaaaaaatgtgcagcgtgtggtcttccacgaaatcaccaaacgt
gccgtgcaagaagccattgccaacccgcgtgaccttgcctatgacttggtggatgcacag
caagcccgccgtgccttggattatctggtcggtttcaacctctccccgttgctatggcgc
aaaattaaacccagcctgtccgccggacgggtgcaaagccccgccttgcgtctgattgtg
gaacgtgaagacgaaatcgagcgcttcgtccgccaagaatattggacgatgaccgcgcaa
aatgccaaaaacgggcaagccttcaacgcccgtttgcacacgctggataaccacaaactc
gaccaattcgacattaataatgaagcgcgagcaaccgaagtgcgtgagcgtttgctgcaa
gctgctaacggcaaactgttagtcagcaaagtcgagaaaaaacagcgcaagcgttacccc
gcgccgccgttcaccacatctaccttgcagcaagaagcggtgcgcaaactcaagttttcc
acccaacgcgccatgcgggttgcccagcaattgtacgaaggcattgatttaggcagcggg
ccggtgggtttaatcacctacatgcgtaccgactcggtaacgctggcaaacgaagccatc
ggcgaattgcgcggcttgattgagcaacgttacggacaagacaagctgccggaaacgccg
aacttctacaaaaccaaatccaaaaatgcgcaggaagcccacgaagcggtacgccccact
tcggcataccgcacaccggaacaggtcaaaagccacctcaatgaagaacagttcaagctg
tacgagttgatctggaaacgcacggttgcctgccaaatgatctacgccacgctggatacg
gtctcggcggatttaagtgctgaagcaggcagttttttccgcgcttccggctcgaccatc
cgcgatgccggtttcttgctggtgtatgaggaaggcttggatgaccgtgccagcgaaaag
gaaaacccgctgccaccgttggaagaaggcgaaagcgtcactctccatgacattgctgcc
gaacaacatttcaccgagccgccaccgcgctactcggaagcctccttggtaaaagcactg
gaagaatacggcattgggcgaccctcgacctacgccagcattatttccaccctgttggcg
cgtgaatacgtcgagctggaaagccgccgtttcaccccgaccgatattgggcgcattgtg
atccggtttttgacggagcatttcacccaatacgtcgattacgatttcaccgcgaatctg
gaaaatgagctggatgaaatttcacgcggtgaaaaagcttgggttccggtgatggatgct
ttctggcaaccgttccacacgctggttgacgaaaagatggaaagcgtcaaccgcagcgac
gtgctgcaatcgcgagagattggcattgatcccgccagtggcagacccgtgtcggtgcgt
ttagggcgctttggtccgatggtacaaatcggtaccaaagacgatgaggaaaagccggtc
ttcgcggggttacgccccggcatgaagctggacacagtgacgctcgaagaagcgctggaa
ctcttcaaactaccccgccaattaggcgacaccgaagacggcaaagccatcagcaccaat
gtcgggcgctttggcgcttacgtcaaatacggcgaccaatttgcatcgctgaaaaaggaa
gacgacccgcacaccattaccttggagcgggcgctggagctgattgccgagaaaaaaatc
aaggatgccgaaaagattctggtggatttcggcaatggcgtgcaaatcctcaaagggcgt
tgggggccgtacatcaacaaagtcattaagcgcgtcaaagtgcaagcgcgtctgcccaaa
gaccgcgaacccgacagcatgaccttggaagaatgcgaagccttgattgccgtcgctgcc
gaagccaaatctgtcaagaaaggcgcgaagaaagcagccgctacgcccgcaacagaatcg
gcagaacagccagccgcagatgctccggcaaagcctgcgaaagccaaagcagcgccgaaa
aaaaccgctactgccaaaaagcccgtagcgaagaaaccggctgcaagcaaaaaaacgcct
agttccaaaaaatcagcgagttaa
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