Thiothrix winogradskyi: L2Y54_02460
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Entry
L2Y54_02460 CDS
T08347
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L2Y54_02460 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twn03400
]
L2Y54_02460 (ung)
Enzymes [BR:
twn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L2Y54_02460 (ung)
DNA repair and recombination proteins [BR:
twn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L2Y54_02460 (ung)
Prokaryotic type
L2Y54_02460 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UJS24916
LinkDB
All DBs
Position
complement(438117..438815)
Genome browser
AA seq
232 aa
AA seq
DB search
MQNTTLPPSWQAAIGAEFTKPYLLTLSHFLQAEAVAGKHILPPPEQRFNALQSTPLDQVN
VVILGQDPYPTPGHAHGLAFSVQPDVAPLPRSLLNINRELQDDLGINNSHTGCLQAWAAQ
GVLLLNTVLTVEAGNAGSHQKRGWETFTDTVIQAISAQTQPLVFILWGNHAQKKTVLIDT
TRHCIIASAHPSPLSARRGFFGSKPFSRANAFLQANGRTQVNWALPSSGNWM
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaccacactccccccaagctggcaagccgccatcggtgcagaattcaccaaa
ccctatttgcttaccctaagccattttctacaagccgaagctgtggcgggcaaacacatc
ctgcccccgccagaacagcgtttcaacgccctgcaaagcaccccgctggatcaagtcaac
gtcgtcatcctcggtcaagacccataccccacacccggacacgctcatggcctagcgttt
tcagtgcaacccgatgttgccccgttgccgcgttcgctgctcaatattaaccgtgaattg
caagacgatctcggcattaacaacagtcacactggctgcttgcaagcgtgggcagcgcag
ggcgtgttgctgctcaacaccgtactgacggtggaagcaggcaatgcaggcagccatcag
aaacgcggctgggaaaccttcaccgatacggtcattcaagccattagcgcccaaactcaa
cccctggtgtttatcctgtggggcaatcacgcgcagaaaaaaaccgtactgattgacact
acccgccactgcattattgccagtgcgcacccatcgcccttgtcagcgcgacgtggcttt
ttcggtagcaaaccgttttcccgcgccaatgcgtttttgcaggcaaacggtagaacgcag
gtcaattgggcactgccttcttcagggaattggatgtag
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