Thiothrix winogradskyi: L2Y54_03495
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Entry
L2Y54_03495 CDS
T08347
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
twn
Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twn03016
]
L2Y54_03495 (rnd)
Enzymes [BR:
twn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L2Y54_03495 (rnd)
Transfer RNA biogenesis [BR:
twn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L2Y54_03495 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
UJS25113
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All DBs
Position
656064..657206
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AA seq
380 aa
AA seq
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MFDYIDNAEKLTDLLARLDSAEWITLDTEFIREKTYYPRLCLIQIASADTLACIDPLALS
DLQPFLDWLNQPQRLKVLHAAWQDMEIFHHLGGGNVPAPLFDTQVAAAVLGMGDQLGYAR
LVEALLGLSLDKSQSRTDWSRRPLTKAQLEYAIDDVRHLRDVYLHLREQLEQLGRMRWLE
KPFQKLADPATYAVDPQTVWERVKGLQILKPQQLAILRELAAWREQRALLKDIPRRWILS
DEILLDMARMQPDSPAALRQIRGLSDEQIERGAGEWLACIARGKAVPKNECPTLPRRRKL
DAEMSVVADVLTALLNQVAHENGISAQMIATRQQLEKMLEEGRTTLSDDWRGALVNDLFT
AVLAGNASLRVRDQQLIVEV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatattgataatgctgaaaagttaactgacctgctggcacggctggattct
gccgaatggattaccttggatacggaattcattcgggaaaaaacctattacccgcgtttg
tgtttgatccagattgccagtgctgacaccttggcgtgtattgacccgctggcgcttagt
gatttgcaaccgtttctggactggcttaaccagccacagcgtttgaaagtcctgcacgct
gcctggcaagatatggaaattttccaccatttaggcgggggcaacgtacctgcaccgctg
tttgatacccaagtcgcggctgccgtattgggcatgggcgaccaattggggtatgcacgt
ttggtcgaagccttgctgggtttgtcgctggataaatcgcagtcacgtaccgattggtca
cgccgccccctgacaaaggcgcaactggaatacgccattgacgatgtgcgccatttgcgt
gatgtctacctacacttgcgtgaacaactggagcagttggggcggatgcgctggctggaa
aaaccgttccagaaactggcagatccggctacgtatgcggttgacccgcagacggtgtgg
gagcgggtcaaaggcttgcaaatcctcaagccacagcaactggccattttgcgtgaatta
gccgcatggcgtgaacagcgggcgttactcaaagatattccccggcgttggatcttgtcc
gacgaaatcttgctggatatggcacggatgcaaccggatagcccagcagcactgcgccag
attcgcggcttgagcgatgaacagattgaacgcggtgcgggggaatggctggcgtgtatt
gcacgtggcaaagccgtacccaaaaatgaatgcccgaccttaccgcgtcgccgcaaactg
gatgcggagatgagcgtggttgccgatgtgctcaccgcactgctcaatcaggtggcacac
gaaaacggcatttcggcgcaaatgattgcgacccgccaacagcttgagaaaatgctggag
gaagggcgtaccaccctgtctgacgactggcgtggtgctttggtgaatgacttgtttacc
gccgtattggcgggcaatgccagcctgcgggtgcgtgatcagcaattaatagtggaagtc
tga
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