Thiothrix winogradskyi: L2Y54_04330
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Entry
L2Y54_04330 CDS
T08347
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
twn
Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twn03016
]
L2Y54_04330 (truD)
Enzymes [BR:
twn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
L2Y54_04330 (truD)
Transfer RNA biogenesis [BR:
twn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L2Y54_04330 (truD)
Prokaryotic type
L2Y54_04330 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UJS25274
LinkDB
All DBs
Position
complement(827188..828267)
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AA seq
359 aa
AA seq
DB search
MNPTTFDTTGFARAYAAPLRGEFRSSPEDFIVDEQMEIALTGSGEHLWVQVRKTGANTDW
VAGQLARCAGVPAKEVGYAGLKDRHAITTQWFSLQLPGIADPDFAALPAEIEVLQQQRHD
KKLRRGALEANRFILTLRQCSGDFAEAAAICEQISQQGIPNYYGDQRFGHNFGNLRKAER
WFAAGVEPKQRNQRSLYLSAARSWIFNNVLAQRVADGTWNQRVPGDVFMFEGGSAWFADD
ASAELPARLATQAIHPTGVLWGRGELPTAIEARDLEAEQAARFPIFCAGLEKQGLKQERR
ALRVNVGTVGFEVVDESTLRLSFALPAGAYATVVLEQLGMFTHFASIVTNPAGSIGLLK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaactacctttgataccacgggctttgcccgcgcttatgccgccccgttacgc
ggtgaattccgcagttcgccggaagattttatcgtcgatgagcaaatggaaattgccctc
accggcagtggtgaacatttgtgggtgcaagtccgcaaaaccggcgcgaataccgactgg
gtggcagggcaactcgcccgctgtgccggtgtgcctgccaaggaagtcggttacgcgggg
ctgaaagaccgccatgcgatcaccacgcaatggtttagcctgcaattgccgggcattgct
gacccggattttgctgccctgcctgctgaaatcgaagttctccagcaacagcgccatgac
aaaaagctgcgacgcggcgcgttggaagccaaccgtttcatcctcaccttgcggcagtgc
agcggtgatttcgctgaagcggctgcgatttgcgaacaaatcagccagcaggggattccc
aattactacggcgaccagcgtttcgggcataacttcggtaatttgcgcaaggcagaacgc
tggtttgcggcaggcgtagaaccaaagcaacgtaaccagcgcagcttgtatttgtcagca
gcgcgttcgtggattttcaataatgtgttggcgcaacgggtcgcagacggaacctggaat
cagcgcgtgccgggcgatgtgtttatgtttgaaggcggcagcgcgtggtttgccgacgac
gccagtgcggaattgcctgcacggttggcaacgcaagccatccacccaaccggcgtcttg
tggggacgtggcgaattgcccaccgcaatcgaagcacgcgacttggaagccgaacaagcc
gcacgtttcccgatcttttgcgcggggctggaaaagcagggtttgaaacaggaacgccgt
gccttgcgtgtcaatgtgggtacggtggggtttgaggtggtggatgagagcaccttgcgc
ctgagttttgccttgccagcgggggcttatgccacggtggtgttggagcagttggggatg
tttacccacttcgccagcatcgttaccaacccggcagggtcgataggtttgcttaaataa
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