Thiothrix winogradskyi: L2Y54_05035
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Entry
L2Y54_05035 CDS
T08347
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn03030
DNA replication
twn03430
Mismatch repair
twn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L2Y54_05035
03430 Mismatch repair
L2Y54_05035
03440 Homologous recombination
L2Y54_05035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twn03032
]
L2Y54_05035
03400 DNA repair and recombination proteins [BR:
twn03400
]
L2Y54_05035
Enzymes [BR:
twn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L2Y54_05035
DNA replication proteins [BR:
twn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L2Y54_05035
DNA repair and recombination proteins [BR:
twn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L2Y54_05035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UJS25407
UniProt:
A0ABY3T2E7
LinkDB
All DBs
Position
979150..981324
Genome browser
AA seq
724 aa
AA seq
DB search
MRRFDKRVAIGVAIIGVICLVWLGVTGALIGASLSESEREAVRNAVGARGVLLVVMWAVS
LVVVGAVLSRLVAYFMTAPARLAEEAQVLLGTDVKRQLVPTGSIENRRLTDLFNQLVQQR
ESLRDEMDVRVAEAAHNTEQEKNRLAALMSELTKSVVVCNLDGRILLYNNRARMQFRKLS
QAPGAIGGTELIGLGRSVYGVFDRKLVAHALENIQHRLQRGAAAPSAQFITTTPSGQLLR
AQMAPVRSPQEGNELPKMTGFVLMLDNITREFEAQARQDSILHTLTERSRAALANMQAAL
DVLEYPDLEPDMHERLLKVLREETAGLGTRLREIKSSAVDGTVLRWPLEDMLGADLVAAA
IRRIETIDNLSAVAEQVDDSLWLKVESFSLLQALSYLAERLKQECVITTLQLRLGMGDGR
AQLDLCWQPSADKATTEVIPGWETDPMRSGGEDTSLTIQDVVERHGGAFWFGRDPDSGTV
FFRFLLPLAAPQEQLETASMVRNESRPEYYDFDLFQSSAQTRSLEDSKLSELSFTVFDTE
TTGLDPANGDEIIQIAAVRIVNGKLLRHESFDQFVDPKRNIPEHTIPIHGITPDMVKGQP
TIDKVLPAFHQFTQDTVLVAHNAAFDMRCLQVKEKVTGLVFDNPVMDTLLLSAVVHPNQE
SHRLEAITERFNINILGRHTALGDSMATAEVFLRLIPLLAEKGIFTLGQAREAAQKTYYA
RLKY
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctttgataaacgtgtcgccatcggggttgccattattggcgtgatttgccta
gtgtggttaggtgttaccggggcattgattggggcatccctgagcgaaagtgagcgtgag
gcggtacgcaatgccgtcggggcgcggggcgttttgctggtggtgatgtgggcggtgtcg
ctggtcgtggtcggtgcggtgttgagccgtctggtggcttatttcatgacagccccggcg
cggctggcggaagaagcccaagtgttgctgggaaccgatgtcaaacgccagctcgtcccc
accggcagtatcgaaaaccgccgcttgacggatttgttcaaccagttggtgcaacagcgc
gaatccttgcgtgacgaaatggatgtacgggttgctgaagctgcccacaacaccgaacag
gaaaaaaaccgtctcgccgcgctcatgtcggaactgaccaaaagcgtggtggtgtgtaac
ctcgacgggcgtattttgctgtacaacaaccgcgcaaggatgcagttccgcaagctgtcg
caagcccccggcgctattggcggtacggaactgatcggtttggggcgttcggtctacggc
gtgtttgaccgcaagctggtggcacacgcgctggaaaacattcagcaccgtttgcaacgc
ggtgcggctgccccttccgcgcaattcatcaccaccaccccgtcgggtcagttgttgcgg
gcgcaaatggcaccggtacgttcgccgcaggaaggcaatgagctgccgaaaatgaccggc
ttcgtgctgatgctcgacaatattacccgcgaatttgaggcacaagcgcgtcaggacagc
atcttgcacaccctgaccgaacgcagccgtgccgcacttgccaatatgcaggcagcactc
gatgtactcgaataccccgacctcgaacccgacatgcacgaacgcttgctgaaagtgttg
cgcgaagaaaccgcagggctgggtacgcgcctgcgcgaaatcaagtcttccgctgtggat
ggcaccgtgttgcgctggccactggaagacatgctgggggcggatttggtagcagcggcg
attcgccgtatcgaaaccatcgacaatctgtccgctgttgccgagcaggtggacgattcc
ctgtggctcaaggtggaaagtttctcactgctgcaagcgctgtcctaccttgcggaacgc
ctcaagcaggaatgcgtgattaccaccctgcaattacggctgggtatgggtgacgggcgg
gcgcaactggatttgtgctggcagccttccgccgataaagccaccacggaagtgattccc
ggttgggaaactgacccgatgcgttctggcggcgaagacacatcccttaccattcaggac
gtggtagaacgtcatggcggggcattctggtttgggcgtgaccctgacagcggtacagtc
tttttccgtttcctgctgccactcgccgctccgcaggaacaactggaaaccgccagcatg
gtgcgcaatgaaagccgcccggaatactacgatttcgacctgttccagagttcggcacaa
acccgctcgctggaagatagcaagctcagcgaactgtcattcaccgtattcgataccgaa
accaccgggcttgaccctgccaacggcgacgaaatcattcagattgcagcggtgcgcatc
gtcaacggcaagctgctgcgccatgagagtttcgaccagtttgttgacccgaaacgcaat
attcccgagcataccattcccatccacggcattacccccgacatggtgaaagggcaacca
accatcgacaaggtattgcccgcgttccaccagtttacccaggataccgtgctggtcgcg
cacaatgcggcgttcgacatgcgctgcttgcaggtgaaggagaaagtcaccggactggtg
tttgacaacccggttatggataccttgctgttgtctgctgttgtccacccgaatcaggaa
tcacaccggctggaggcgattaccgaacgttttaacatcaatatcttggggcggcatacc
gcgctgggggattcgatggcgacggcggaagttttcctacggctgattccgctgctggca
gagaaaggcatctttaccttggggcaggcgcgggaagccgctcagaagacgtattacgcc
cgcctgaaatattga
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