Thiothrix winogradskyi: L2Y54_07075
Help
Entry
L2Y54_07075 CDS
T08347
Name
(GenBank) cadherin domain-containing protein
Organism
twn
Thiothrix winogradskyi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IgGFc_binding
Cadherin
TSP3_bac
TSP_3
Motif
Other DBs
NCBI-ProteinID:
UJS25799
LinkDB
All DBs
Position
complement(1410641..1416160)
Genome browser
AA seq
1839 aa
AA seq
DB search
MKSSFHQQAATHRKSALASLILSATLALAVSPTVLANSCEGAGGSGGRQFWLGVLGNYNN
GGAIHLNLVGKEGTTGTLSSKDGSWSLDYTIPASGFFETDLPNSFQVSGDGVILNNGLKI
TGNNDVSAYIINEQTYTTDGFLGYPTNALGNEYYVIGYNGFDATVPSRGVIVASQDNTSV
TVTKPGGVPANITLNEGQVYSFENGANDITGSHVVSDKPVSVFGGSACSNVPVGNPSCDT
LVEQMLSVKDWGVEYVVPPIPYGQMLRVVAAEAGTEVYQDGTLVATLGAGGIWTGNPTNN
DTVHRFTTNGKKIQVAQYAVGSQFSGTAEVDPAMGIVPSREIWLSRHIFKAQPNFANTLL
IVSPTANTGDLKINGAAPATAPTWIAVPNSDLSWTKIVVTAGAMYTISSNVEIGITVFGG
KTYESYMLPGNMGLGDFDLDAIRDPQDCDADGDGILNSVEKANALPGTNGDSDGDGRVDE
LDLDSDNDGIPDNIEAQTTAGYIAPSGTISDSGLDTAYGTGLTPVDTDGDSIPDYIDQDS
DGAGTSDTIEAGITLTGSDSDNDGLDDSVDSDDNIYGPNNAGITDVLNAYPKNGSEVNWR
ILGNHAPVISTGSGNDTYTVSVPEGKTNTGVDYAATDTDGETEGAGLTWSLSGADAALFN
IDPNTGIISFKAAPSWGTPQDAGANNVYDVIVTVTDATGEIDKQTLAITVTEVDTDGDGV
GNSKDNDVDGDGIPNATEGTSDADGDGIANDFDLDSDGDGIPDNIEAQTTAGYKPPSGTV
SASGVDTAYGAGLTPVNTDGTDTPDYLDTDSDNSGANDTTEAKLTLANADADKDGLDDAI
DADDASFGSANAGITDVLGTYPKVGTQVNWRAVNAAPVIPTPAALDYVEKTTTPAADLAA
TDDTDTEGDKLVYSMTGGDDMALFTIDPATGVLTFKAPPSFAAPTDKDGNNTYLVEVATT
DGEGAITKKLLTITVLKDTDHDGVGDKNDLDVDGDGILNSVEGTADTDGDSIQNQWDLDS
DGDGIPDNIEAQATAAFKAPSGVDADKNGVDDAYGAGLVPVDTESDGKPDYLDLDSENTG
GDDNTESDVPVLSGVDADKDGLDDTIDTDDTNFGPANAGITDMLAAYPKTGAEVNWRVPN
TPPVFTSATAAAFDENSTAVVLNVETTDDKNSEATSTIGYSIVGSDDDARFTIDAKTGDI
KFKLVPDYEKPIDKNKDNAYTLTVKACDMEGGCSEQTIIINVVDVDEDNDSDDLMDSKEA
ELGTDRWKADTDGDGLNDGEEVNTLKTDPLKTDTDADGLSDGDEVLKSKTDPLNPDTDGD
GVGDLAEVGADPANPLDSDGDGTADAFDTDDDNDGVLTKDEMPNPNGDLNPDDARNTDGD
LLPDYLDNEDDGDGVLTKYEDPAGKRDSDKDGKLDYLDDDDDNDGLLTEYEQADPNKDGN
PADQRDTDKDGIADWLDNDDDGDGVLTQYEMADKDGNGNPTDATDTDGDGKFNWLDNDDD
GDGILTKFEQPDPNGDGNPADALDTDKDSKPNYLDSDDDGDSKLTVDEKADKNKDGNPAD
AYDADADGIPSYLDANEIPTVVLHVRGFLQGAYNTADGLMRDDLRKQGLIPAVQPYTNAV
TSLGYAGTEALAPSLLTLNDDNALVDWVVVELRSKASPKTVVARTAAVLQRDGDVANPQT
NEAKLLIPNVVEGQYYVSLRHRNHLGVTTQDAMLLSPTLTAVDFTLPSQTVMGSHARLLG
KDAALMWAGEANNSDSVIANGPGNDTNVVLGTVLMHPTNLLTNSNFRLKGYYVTDLNLDG
ISLYSGPSNDINLLLGNVLLHPGNGLFAANYMMLGAMPK
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttcattccatcagcaggctgccacgcatcgcaaatcagctttagccagctta
atcctgtcagccacactagctttggctgtttcacctacggtactcgccaatagttgcgag
ggagctggtggctcagggggtcggcaattctggctaggcgtactgggtaactacaacaat
ggcggcgctattcacctcaacttagtgggcaaagaagggacaaccggtacgctaagcagc
aaagatggcagttggtcattggactacacaattcccgcttcaggcttctttgaaacagac
ctaccaaacagctttcaggtcagtggcgatggcgtcattctcaacaacggtttaaaaatc
accggcaacaacgatgtatcagcctacatcatcaacgaacaaacctatacaaccgacggt
tttttgggatacccaaccaacgcactcggtaatgaatattatgtgatcggttataacggt
tttgatgccacagtaccctcacggggtgtcatcgttgcctcgcaagacaataccagcgtt
accgtcaccaagccgggtggtgtaccagccaacattaccttgaatgaaggccaagtttat
tcctttgaaaacggtgctaacgatattacaggctcacacgttgtttccgacaaacccgtg
tccgtttttgggggttctgcctgctcgaatgttccggttggcaacccgtcgtgcgacacc
ctagtggaacaaatgctatccgtcaaagattggggggtggaatacgttgttcccccgatt
ccttacgggcaaatgttgcgggtagtagctgcggaagcaggcacagaagtctatcaagat
ggcacattagtggcgactttgggtgcaggtgggatttggacaggcaatcctacgaataat
gatacggtgcaccgctttacgaccaatggaaagaaaatccaagttgcccaatacgctgtt
ggctcacaattcagtggcacagccgaggttgacccagcgatgggtattgtaccttcgcgg
gaaatttggctcagtcgccacattttcaaagctcaaccgaactttgccaacaccctattg
atcgtctcaccgacagccaatacgggggatctgaaaatcaacggtgccgcaccggcaact
gcccccacttggatagctgttcccaactccgacttgtcgtggacaaaaattgtagtgact
gcgggtgcgatgtacaccatcagcagtaatgtcgaaatcggcatcaccgtttttggtggt
aaaacctacgaatcctatatgttgccggggaacatgggattaggtgacttcgaccttgat
gctatccgcgacccacaagactgtgatgccgatggcgatggcatcctcaactctgtagaa
aaagccaatgccctacctggcacaaacggtgattcggacggcgacgggcgcgttgacgag
ctggatctggacagtgacaacgatggcattcccgacaatatcgaagcccaaaccaccgct
ggctatattgcaccgtctggcacaatcagcgactcaggcttggacactgcttatggcacg
ggcttaacacctgtggatactgacggtgacagcattcccgattacatcgaccaagattct
gatggcgcaggcacaagcgacaccattgaagcggggattacgctaacgggaagcgattcg
gataatgacggcttagatgatagtgttgactccgacgataatatttatggccctaacaac
gctggcataaccgatgttttaaatgcttacccaaagaatggctctgaagttaactggcgg
atactcggcaaccatgcaccagtcatttccaccggcagcggcaacgacacctataccgtt
agcgttcccgaaggcaagaccaacaccggcgtcgattatgcggcgaccgatactgacggt
gaaaccgaaggtgctggtctaacatggtcactcagcggtgcagacgctgcattatttaat
attgacccaaacaccgggatcatttccttcaaagccgcaccgagttggggtactccccaa
gatgctggcgcgaacaatgtgtatgatgtcatcgtcaccgttaccgatgcgactggcgag
attgacaagcaaaccttagcgataacagtcaccgaagtcgacaccgacggcgacggcgtt
ggcaactcgaaagacaacgacgtggacggtgacggcattcccaatgcgacagaaggtacg
agtgatgccgacggtgatggcattgccaacgatttcgatctcgattccgacggcgacggc
attcctgacaatatcgaagcgcaaacgaccgctggttacaaaccaccttccggcacagtg
agtgcatcgggtgtggatacggcctacggtgctggtttaacccctgtgaatactgacggc
acagacacaccggattacctagataccgattccgacaacagcggcgcaaacgataccact
gaagccaaactcaccttggctaacgcggatgcagacaaagacggtctggatgacgcgatt
gacgctgacgatgccagttttggctctgccaatgcgggcattaccgacgtattggggact
tatccgaaagttggcacacaggtaaactggcgggcagtcaatgctgcgccagtcattcca
accccagccgcgctggattacgtggaaaaaaccaccaccccagccgctgaccttgcggca
actgacgacaccgacaccgaaggtgacaagctggtctacagcatgaccggcggggatgac
atggcactgtttaccattgacccggcaaccggcgtgctaaccttcaaagcccctcccagc
tttgctgcccccaccgacaaagacggcaacaacacctatctggtggaagtggctacgact
gacggcgaaggcgcgatcaccaagaaactgctgaccattaccgtgctgaaagataccgac
catgacggtgtaggcgacaaaaacgacctcgacgtagacggcgatggcatcctcaacagc
gtggaaggcacagccgacaccgacggggacagcatccaaaaccagtgggatttggactct
gacggcgacggcatacccgacaatatcgaagcgcaagccaccgctgcattcaaagcccca
tccggtgtagatgccgataagaacggtgtggatgatgcctacggcgcgggtcttgtgcca
gtggataccgaaagcgatggcaagccggactaccttgaccttgattccgaaaataccggc
ggcgatgacaataccgaatctgatgttcccgtgctgtctggcgtggatgcggataaagac
ggcttggatgacaccatcgacaccgatgacaccaacttcggccctgccaacgcaggcatc
actgatatgctggcggcttacccgaaaaccggcgcagaagtgaactggcgcgtacccaat
acgccgcccgtattcacctcagcaacggcagcagctttcgatgaaaacagcacggcggtg
gtgctgaacgtggaaaccacggacgataaaaacagtgaagccacttctaccatcggttac
agcattgtcggctcagatgatgatgcgcgtttcaccattgatgcgaaaacgggtgacatc
aagttcaaacttgtgccggattatgagaaacccatcgacaagaacaaggataacgcttac
accctaaccgtgaaggcgtgcgacatggaaggcggctgtagcgaacaaaccatcatcatc
aacgtggttgacgtggatgaggataatgacagcgatgacctgatggattccaaggaagct
gaactgggtactgaccgctggaaagcggataccgatggcgatggcttaaatgacggtgaa
gaagttaacaccctgaaaactgacccactgaaaaccgacaccgacgctgacgggctaagc
gatggcgatgaagtactgaaatccaaaactgatccgttaaatcctgacaccgatggtgat
ggcgttggtgatctagctgaagtaggtgcagatccggctaatccgttggatagcgacggt
gatggcacagcggatgccttcgacactgacgatgacaacgatggtgtactcactaaagat
gaaatgcctaacccgaacggtgatctgaacccggatgatgcgcgtaacaccgacggcgac
ctgctgccggattacctcgacaacgaagacgatggtgacggcgtgctgacaaagtacgaa
gacccggcaggcaagcgtgattccgacaaggatggcaaactggattatctggatgatgat
gacgataacgacggcttgctgaccgagtacgaacaggcagacccgaacaaagacggcaat
ccggctgatcaacgcgataccgataaagacggcattgcagattggctagacaacgacgat
gacggtgacggcgtattaacccagtatgaaatggcagacaaagacggtaatggcaatcca
accgatgcgaccgataccgacggggacggcaaattcaactggctagacaatgacgatgac
ggcgacggtattctaaccaaattcgagcaaccagacccgaacggtgacggcaatccggca
gatgcgctggataccgacaaggacagcaaacctaactacctcgacagcgatgacgacggt
gacagcaagctgacagtcgacgaaaaagccgataagaacaaggatggcaatccagccgat
gcgtatgacgcagacgcggatggcattccaagctacttagacgcgaacgaaatccccacc
gtggtcttgcatgtgcgcggctttttacaaggtgcttacaacacggcagatggattgatg
cgcgatgatttgcgcaagcaaggcttgattccagccgtacagccttacaccaatgcggtc
acgtcattaggctatgctggcacggaagccctagccccgtcattgctaacactcaacgat
gacaacgccctggtggattgggtcgtggtggaattgcgtagcaaggcatcccccaaaacc
gtggttgccagaacagcggcagtcctgcaacgtgacggtgacgtggctaacccacaaacc
aacgaggcgaagttgctgattccgaatgtggtggaaggtcagtattacgtgagcctgcgc
catcgcaaccatctgggcgtgaccacgcaggatgcaatgttgctgtcacccacattgacg
gcggtggatttcacgctgccatcgcaaaccgtgatgggtagccatgcccgcttgctaggt
aaagatgcggcgctcatgtgggcaggtgaagccaacaatagcgatagcgtgattgccaac
ggccccggcaacgacaccaacgtggtgctgggtacggtgttaatgcacccgaccaatttg
ctgaccaacagcaacttccgcttgaaaggctactatgtcaccgatctgaacttggatggc
attagcctctactccggccccagcaatgacattaacttattattggggaatgtgttgctg
catccgggtaatggtctgtttgctgctaactacatgatgctgggtgctatgcccaagtaa
DBGET
integrated database retrieval system
