Thiothrix winogradskyi: L2Y54_07550
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Entry
L2Y54_07550 CDS
T08347
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
twn
Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twn03021
]
L2Y54_07550 (rpoH)
Transcription machinery [BR:
twn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L2Y54_07550 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
UJS25889
LinkDB
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Position
1494540..1495409
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AA seq
289 aa
AA seq
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MTNAMMLKGQTLPVPVGNLESYIHTIHAIPVLEVEEERELAERLKYASDLEAARQLILHN
LRFVVKVARGYSGYGLPLGDLVQEGNVGLMKAVKRFDPDMNVRLISFAVHWIRAEIHEFI
LRNWKIVKVATTKAQRKLFFNLRSSKKRLGWLNQEEAQSMADDLGVTTAEVLEMEKRMSA
HDVSFDLSIDQDEDDSANFSPSQYLVAESADPAETLEAEEWDAYTRGRFQTALANLDARS
RDILASRWLVEEKATLHELAEKYSVSAERIRQLENAAVSKLRLAVVEAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgccatgatgctcaaagggcaaacacttccggttcccgtggggaatctggaa
agttacatccatacgatccacgccattccggttctggaagtagaggaagagcgtgagtta
gctgaacgtctgaaatatgccagtgatttggaagcagcccgtcagctcattttgcacaac
ttacgctttgtggtgaaagtggcgcgggggtatagcgggtacggcttaccgttgggcgat
ttggtgcaggaaggcaacgttggcttgatgaaagcagtgaagcgtttcgaccctgatatg
aatgtacgactgatttcgtttgcggtgcattggattcgcgcggagatccatgagttcatt
ttgcgcaactggaaaatcgtcaaagtggcgaccactaaggcgcaacgcaaactgttcttc
aacttgcgcagcagcaaaaagcgcttgggttggttgaatcaggaagaagcgcagtcgatg
gcagatgatttaggggtgacaactgccgaagtgctggaaatggaaaagcgtatgagtgcg
catgatgtgtcatttgatctcagtattgatcaggatgaagacgattctgccaatttttcc
cctagccaatatttggtggcagaatcggcggacccggcagaaaccttggaagcggaagag
tgggatgcttatacccgtggacgtttccaaacagccttggctaacttggatgcccgcagc
cgtgatattttggcgagccgttggttggttgaagagaaagcaaccctgcacgagttggca
gaaaaatatagcgtatcggcagagcggattcgccagcttgaaaatgcggcggtgagcaag
ttgcgcttagccgtggtggaagccgcataa
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