Thiothrix winogradskyi: L2Y54_07725
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Entry
L2Y54_07725 CDS
T08347
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L2Y54_07725 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twn03400
]
L2Y54_07725 (recC)
Enzymes [BR:
twn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L2Y54_07725 (recC)
DNA repair and recombination proteins [BR:
twn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L2Y54_07725 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UJS25923
UniProt:
A0ABY3T3C7
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All DBs
Position
1532226..1535402
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AA seq
1058 aa
AA seq
DB search
MLYLHHSNQLEQLAQQFAQLQRDNPLEPLAKEQVVVQNSGMGRWLSLQTAGYNGITANIR
YLFPAEMTWELLRMVLAEVPEKDPCAPTVMRWRLFDIFLSEADEWPELARYLSGGATAAW
QLAAQVAKVFDQYLFFRPDWIREWESGKGASDDWQARLWWRVAGEQQLPHWVRLQERFAH
ALASIDPAVLPKRICFFSVPVLSPGYVQLLGKVAEYLDIHIYLMNPCADYWGDIESEKRK
HKQQADVQDYFSVGNPLLASWGRQGRDFLDLLIEANADLDDVELFGEPDESTLLGRIQTD
MLLLRMPEVMEWDATDTSIAFHACHSPMREAEVLYDQLLALFTAHPDVTPADVVIMTPDI
DKYAPYLDAVFSSAPYPLPFSIADRSPGYAQSITNLCEHLLSIPQGRCDVESVLTLLEFE
EMRARIGVDEAQVQQCRAWIRAVNIRWGTDAGMRPELGGANTPEHTWRYGLDRLLLGYAM
PGEALFNGILPWNEIEGSQAEMLGRLQQVLEAVFELASWGRQAQTLAEWNRRFRYLLDAV
VGDDAPLQAVWQALDNLEKTVTQAGFGQPLEWAVFQSALAEQLDKRSESDGFLGRGITCC
ALMPMRTVPFRFVALIGMNDGIYPRRDARDSFDRMGQGIKRGDRLKRDEDRYLFLESILS
ARDWLYLSYVGQSPHDNSELPPSVLVSELMDYLERCVPDCREALLTKHPLQAFSQKYLRG
QDGLFTYNRFFQTSTSTEENPTPTLPLSREGVRGTDYCFAPPLIRGGWEGFLPPPDPAYR
SLNLADLIRFYQNPARVFLKERFGLRLNEYAEELPVREPFGLEKYRDRDVRECIFQQLQQ
ALPVSSAEPLLRAQGLLPHGKPGELVFRKEADVTEEFFNRIQPLAVFQRAPFSLTDGDFY
LSGTINKLDVMAGRTLYELGKLSYWNWLDAWLHHLALNTLPESICPHVTLIHTPEDSYQL
EPVSDAREQLQQLLAWYWQGLQAPLPFFPKSGFNLMEQKEPEVAKVMSTWEGSGNFSGEC
AKPEYRLLYRDSNPLETHEAEFLAIAHGVFGQMLSVRK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgctttacctgcaccattccaatcagctcgaacaactcgcccagcaatttgcgcagtta
cagcgtgacaatccgctcgaacccttggcgaaagaacaagtcgtggtgcaaaacagcggc
atggggcgctggctttcgctgcaaaccgctgggtataacggcattactgccaatattcgt
tatttgttcccggcagaaatgacgtgggaattattgcgcatggtgttggcggaagttcct
gaaaaagacccgtgtgcgccaacggtgatgcgctggcgattgtttgatattttcctgagt
gaagcggatgaatggccggaactggcgcgttatttgagtgggggtgcgaccgcagcttgg
caattggcggcgcaggttgccaaagtttttgaccaatacctgttttttcgcccagactgg
attcgcgaatgggaaagcggtaaaggcgcaagtgatgactggcaagcgcggttgtggtgg
cgcgttgccggtgaacaacagttgccgcattgggtgcgcctgcaagaacgttttgcgcac
gcgcttgccagcattgatccggcggtgctgcctaaacgtatctgctttttttccgtgccg
gtgttgtcgccgggttatgtgcaattgctggggaaggtggcggaatacctcgatattcat
atttacctgatgaacccgtgtgcggattattggggcgacatcgaatccgaaaagcgcaag
cacaaacagcaagccgatgtgcaagattatttcagtgtcggcaaccctttgctggcatcg
tgggggcggcaggggcgtgattttctggatttgctgattgaagccaatgccgatttggat
gacgtggaactgttcggcgaaccggatgaaagcacgttgctggggcgaattcaaaccgac
atgctgttgctgcgaatgccggaagtgatggaatgggatgcaaccgatacctccatcgcg
tttcacgcctgtcactcgccgatgcgcgaagccgaagtgttatacgaccaactgttggcg
ctgtttaccgcgcatcctgacgtgactccggcggatgtggtgattatgacgcctgatatt
gataagtatgcgccgtatttggatgcggtgttttccagtgcgccgtacccgttgccgttt
agcattgcggatcgcagccccggttatgcgcaaagcattaccaatctgtgcgaacatttg
ctgagtattccacaagggcgttgcgatgtcgaaagcgtgctgactttgctggaatttgag
gagatgcgggcgcgtatcggcgtggatgaagcgcaagtgcagcaatgccgcgcctggatt
cgtgccgtcaatattcgctggggcacggatgccggaatgcgtcccgaactcggcggtgca
aatacccccgaacatacctggcgttacgggctggatcgtttgttattgggttacgccatg
cccggtgaggcattgttcaacggtattttgccttggaatgagatcgaaggcagccaagcc
gaaatgctagggcgcttgcagcaagtgttggaagcagtattcgagttggcaagctggggg
cgacaagcgcaaacccttgccgaatggaaccggcgttttcgctacttgttggatgcagtg
gtaggcgacgatgcaccgctgcaagccgtgtggcaagccttggataatttggaaaaaacc
gtgacgcaagccggtttcgggcagccgttggaatgggcggtattccaaagtgccttggcg
gaacaactcgataaacgcagcgaatccgacggttttctggggcgcgggattacctgttgt
gccttgatgccgatgcgcaccgtgccgtttcggtttgtggcattgattggcatgaatgac
ggcatttacccgcgtcgtgatgcccgcgacagtttcgaccgcatggggcaaggcattaaa
cggggcgaccgtctcaagcgtgacgaagaccgttacctgtttctggaaagtatcctctcg
gctcgcgattggttgtacctcagctatgttgggcaaagcccgcacgataatagcgaattg
cctccatcggtgctggtcagtgaacttatggattacctggaacgctgcgttcccgactgc
cgcgaagcattgttgaccaaacacccgttgcaagcgtttagccaaaaatacttgcggggt
caagacggcttgtttacgtacaaccgttttttccagacatcaacgtctactgaagaaaac
cccaccccaaccctccccttatcaagggagggcgtaagaggaacggattactgttttgct
cctcccctgataaggggaggttgggaggggtttcttcctccccctgatcccgcctaccgt
tcacttaatctggcggatttgatccgcttttaccaaaacccagcgcgagttttcctcaaa
gaacgtttcggtttacgcttgaacgaatacgccgaagaactgccagtacgtgagccattc
ggcttggaaaaataccgtgaccgtgacgtgcgcgaatgtattttccagcaattgcaacaa
gccttgccagtaagctccgctgagccgctgttgcgggcgcaaggcttattgccgcacggc
aaacccggtgaattggtgtttagaaaagaggcggatgttaccgaggaatttttcaaccgg
atccagcccttagcagtgtttcagcgtgcaccgtttagcctaacagatggcgatttctac
ctcagtggtacgatcaataaattggatgtgatggcggggcgcacactctacgaactcggc
aaactgagttactggaattggctggatgcgtggctacaccatctggcgttgaatacgttg
ccggaaagtatttgcccccacgtcacgctgattcacacgccggaagacagttaccagctc
gaacccgtcagtgatgcgcgtgaacagttgcaacaattgttagcgtggtattggcaaggt
ttgcaagcgccgttaccgtttttccccaaatccggcttcaatttgatggagcaaaaagag
ccggaggtggcaaaagtcatgagtacgtgggagggcagtggtaactttagcggcgaatgc
gcaaagcctgaataccgcttgttgtaccgtgacagtaacccgttggaaacgcatgaggca
gaattcctagcgattgctcacggcgtattcgggcagatgcttagcgtaaggaaatga
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