Thiothrix winogradskyi: L2Y54_11695
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Entry
L2Y54_11695 CDS
T08347
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
twn
Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twn03016
]
L2Y54_11695 (truB)
Enzymes [BR:
twn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L2Y54_11695 (truB)
Transfer RNA biogenesis [BR:
twn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L2Y54_11695 (truB)
Prokaryotic type
L2Y54_11695 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF3135
Motif
Other DBs
NCBI-ProteinID:
UJS22609
LinkDB
All DBs
Position
2287970..2288893
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AA seq
307 aa
AA seq
DB search
MSKRRFRKLNGILLLDKGLGVSSNKALQDARFLFQAEKAGHTGSLDPLASGMLPVCFGEA
TKVSAFLLDSDKRYLTTATLGYVSTTGDAEGEKLNPRPIPEITDALLETVLAQFRGEISQ
IPPMYSALKKDGQPLYKLARQGVEVERAARAVTIHALQVLSRTPDSLTLDVTCSKGTYIR
TLVEDIGEKLGCGAYVSMLRREAVEPFGALRMYTLEELRALAEPDPEALDALLLPLDAAL
PHIPALTLAEAVIVRLRQGQKVRTDDADAELLRLYSESGEFIGLGEASNGVIIPRRLLAY
TPASPVA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaagcggcgttttcgcaaactgaatggcattttattgctggataagggcttaggc
gtatccagcaataaagcgttacaagatgcacgtttcctgtttcaggcggaaaaagctggg
cataccggcagtctcgatccgctggcttccggtatgttaccggtgtgttttggtgaagcc
accaaagtgtctgcttttctgctcgattctgataagcgttatctcaccacagcaaccttg
gggtatgtgagtaccacgggtgatgcggaaggtgaaaagctcaatccgcgccccattcct
gagattaccgatgcgttgctggaaacggtgctggcgcaattccgtggtgagattagccaa
attccaccgatgtattccgcgctgaaaaaagacgggcaaccgctttataagctggcgcgt
caaggtgtggaagtggaacgtgccgcacgtgccgtgacgattcatgccttgcaagtgctg
tcacgtacccccgattcgctgacgttggatgtgacgtgcagcaaaggcacgtatatccgc
acactggtggaagacatcggtgaaaagctggggtgtggggcgtatgtttcgatgttgcgg
cgtgaagcggttgagccgtttggggcattgcgcatgtacacgttggaagaattacgggca
ttggcggaacctgaccctgaggctttggatgcgttgctgttgccgttggatgctgccttg
ccgcacatacccgctcttaccttggctgaagccgtgattgtgcgcttacgtcagggacaa
aaggtgcgtaccgacgatgctgatgccgaactgctgcgtttgtacagcgaatccggcgaa
ttcatcggcttgggtgaagccagcaatggggtgattattccccggcgtttattggcgtac
acgcctgcctcacctgttgcttaa
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