Thiothrix winogradskyi: L2Y54_12265
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Entry
L2Y54_12265 CDS
T08347
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2Y54_12265 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twn03019
]
L2Y54_12265 (groL)
03110 Chaperones and folding catalysts [BR:
twn03110
]
L2Y54_12265 (groL)
03029 Mitochondrial biogenesis [BR:
twn03029
]
L2Y54_12265 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twn04147
]
L2Y54_12265 (groL)
Enzymes [BR:
twn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
L2Y54_12265 (groL)
Messenger RNA biogenesis [BR:
twn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
L2Y54_12265 (groL)
Chaperones and folding catalysts [BR:
twn03110
]
Heat shock proteins
HSP60 / Chaperonin
L2Y54_12265 (groL)
Mitochondrial biogenesis [BR:
twn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
L2Y54_12265 (groL)
Exosome [BR:
twn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L2Y54_12265 (groL)
Exosomal proteins of other body fluids (saliva and urine)
L2Y54_12265 (groL)
Exosomal proteins of breast cancer cells
L2Y54_12265 (groL)
Exosomal proteins of colorectal cancer cells
L2Y54_12265 (groL)
Exosomal proteins of bladder cancer cells
L2Y54_12265 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
UJS22718
LinkDB
All DBs
Position
2390836..2392476
Genome browser
AA seq
546 aa
AA seq
DB search
MSAKEVRFGDDARVRMVRGINVLANAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELEDKFENMGAQLVKEVSSKTSDAAGDGTTTATVLAQAIVREGMKSVTAGMNPMDLKRGI
DKAVIAAVAELHKMSKPCADTNAIAQVGSISANSDDAIGNIIATAMDKVGKEGVITVEEG
SGLDNELDVVEGMQFDRGYLSPYFVNNQQSMSAELESPFVLLYDKKISNIRELLPALEGA
AKAGKPLMIIAEDIEGEALATLVVNNIRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLALDKVTLDDLGQAKRINVTKDNTTIIDGAGSPDDIKARVDQVRSQIETTSSDY
DREKLQERVAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAIADLKGDNHEQDVGIQIAMRAMEEPLRQICANAGDEPSVILNAVKAGEGNYGYNA
RTSEYGDMIAMGILDPTKVTRTALQNAASVSGLIITTEAMVAEMPKKDGGGAMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaaagaagtacgttttggtgatgacgctcgcgttcgcatggttcgcggcatt
aatgttctggcaaacgctgtaaaagttaccttgggccctaagggtcgtaacgttgtgctg
gaaaaatctttcggcgcaccgactgtgaccaaagacggcgtttccgttgccaaagaaatc
gaactggaagacaagttcgagaacatgggcgcacagttggttaaagaagtttcaagcaaa
acttctgatgctgctggtgacggcacaacgactgcaaccgttctggcacaagcgattgtg
cgtgaaggcatgaagtctgttaccgctggaatgaacccaatggatctgaagcgcggtatc
gacaaagcagtcatcgctgcggttgctgaactgcacaagatgtccaagccttgcgcagat
accaatgccattgcccaagtcggtagcatttctgctaactctgacgacgctatcggcaac
atcattgctaccgcaatggacaaagttggcaaagaaggcgtcatcaccgttgaagaaggc
tcaggtctggacaacgaattggacgtggttgaaggtatgcagttcgatcgtggctacctg
tccccatactttgtgaacaaccaacaaagcatgtcggctgaactggaaagcccgtttgta
ctgctgtacgacaagaaaatttccaacatccgtgaactactgccagccctcgaaggcgct
gctaaagcaggcaaaccactgatgatcatcgcggaagacatcgaaggcgaagcactggcg
acgctggttgttaacaacatccgtggtatcgttaaagtggcagcggttaaagcaccgggc
ttcggcgaccgtcgtaaagccatgttgcaagacatcgctatcctgactggcggcactgtg
atttctgaagaagtcggtttggcgttggataaagtcacgctggacgatctgggtcaagcg
aaacgcatcaacgttaccaaagacaacaccaccatcattgatggcgcgggttctcctgat
gacatcaaggcgcgtgttgaccaagtgcgttcacaaatcgaaaccacttcatctgattat
gaccgtgaaaaactgcaagaacgcgttgccaaactggctggcggcgttgcggtcatcaag
gtcggtgctgctactgaaatcgagatgaaagagaagaaagctcgcgttgaagatgccctg
cacgctacccgtgctgcggttgaagaaggcgttgttcctggcggtggtgttgcactggta
cgtgcgctgcaagcgattgcagacctgaaaggtgacaaccacgagcaagacgtaggcatc
caaattgctatgcgtgcgatggaagagccactgcgccaaatctgcgctaacgctggtgat
gagccatccgttatcctgaacgcggtaaaagcaggcgaaggtaactacggttacaacgca
cgtacttccgagtacggcgatatgatcgcgatgggtatccttgacccaactaaagttacc
cgtactgctttgcagaacgcggcatctgtttctggcttgattatcacgaccgaagcaatg
gttgctgagatgccgaagaaagatggcggcggtgcaatgcctgatatgggcggcatgggt
ggtatgggcggcatgatgtaa
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